| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1411 |
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| Symbol | |
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| ID | 6409068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1489200 |
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| End bp | 1490813 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711310 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_001990426 |
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| Protein GI | 192289821 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.114372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCATC CACCGCGTTG GATGCGCTCG GTCGTCGCGT CGAAAATCGC TGTGCCGGCG
TTCGCGCTCG CGGCATCGTT GACGCTGCCG GCGGCCGTCG ATGCCAAGAC GATCCGCGCC
GTCATGCATT CCGACCTGCG TATCATCGAT CCCGGCCTGA CCACCGCCTA CATTACCCGC
GACCACGGCT ATATGGTGTA CGACACGCTG CTGGCGATGG ACTCCAAGTT CAAGGTCCAG
CCGCAGATGG CGGACTACAA AGTCTCAGAC GACAAGCTGA CCTACACGTT CACGTTGCGC
GACGGACTGA AGTGGCACGA CGGCACCCCG GTCACCGCGG AGGATTGCGT CGCCTCGCTG
AAACGCTGGG GCCAGAAGGA CGGCATGGGC CAGAAGCTGA TGCAGTTCAC CGCCAGCCTC
GAAGCCACCG ATCCCAAGAC CATCACGCTG AAGCTGAAGG AGCCCTACGC GCTGGTGCTG
GAATCGATCG GCAAGCCGTC GTCGCTGGTG CCGTTCATGA TGCCGAAGCG GATCGCCGAG
ACGCCGGCCG ACAAGCCGAT CCCAGAGCAG ATCGGCTCCG GCCCGTTCAA GTTCGTGGCC
TCGGAATTCC AGCCCGGCGT CAAGGCGGTG TACGTGAAGA ACCCCGACTA CATCCCGCGC
AAAGAGGCGC CGGACTGGAC CTCGGGCGGC AAGGTCGTGA AGGTCGACCG CGTCGAGTGG
ATCACCATGC CGGACGCGCA GACGGCGGTG AACGCCCTGC AGTCGGGTGA CATCGACTTC
ATCGAGAACC CGTCGTTCGA CTTGCTGCCG GTGCTGGCGC AGGACAAGGA GCTGACGATT
GACACGCTGA GCCCGCTCGG CTTCCAGACT CTCGGCCGGA TGAACTTCCT GCACCCGCCG
TTCGATAATC CCAAGGTTCG CCGCGCCGCC TTCCTGGCGA TGAGCCAGAA GCCGGTGCTC
GACGCGCTGG TCGGCAATCC GAAGTACTAC AAGATCTGTG GCGCCGTGTT CGGCTGCGGC
ACGCCGCTCG AGACCGACGT CGGCTCCGAG ACGCTGGTCA AGGGCAACGG CATGGCCGAG
GCCAAGAAGC TGCTCGCCGA ATCCGGCTAC GACGGCACGC CGATCGCGCT GATGGCGCCC
GGCGACGTGG TGACGCTGAA GGCGCAGCCG ATCGTCGCTG CTCAGTTGCT GCGTGACGCC
GGCTTCAAGG TCGACGTCCA GGCCACCGAC TGGCAGACCG TGGTGTCGCG CCGCGCCAGC
CAGAAGCCGC CGAGCGAAGG CGGCTGGAAT ATGTTCTTCA CCAACTGGGC CGGCCCCGAC
ATTCTCAATC CGGTCGCCAA CGTTTCGGTC GGTGGTCAGG GCAAGAAGGG CGGCTGGTTC
GGCTGGGCGG AGGACGCCAA GGTCGAGGAG CTGCGCGACA AGTTCGTCCG CGCCAACTCG
CCGGACGAGC AAAAGAAGAT CGCCGAAGAG ATCCAGAAGG AAGTCTATGA GCAGGTGATC
TACATTCCGC TCGGCCAGTA CACCGCGCCG AGCGTGTGGC GCAAGGAGCT CTCCGGCATC
GTTCACGGCC CGGCGACCCC GGTGTTCTGG AACATCGACA AGCAGGGCGA CTGA
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| Protein sequence | MFHPPRWMRS VVASKIAVPA FALAASLTLP AAVDAKTIRA VMHSDLRIID PGLTTAYITR
DHGYMVYDTL LAMDSKFKVQ PQMADYKVSD DKLTYTFTLR DGLKWHDGTP VTAEDCVASL
KRWGQKDGMG QKLMQFTASL EATDPKTITL KLKEPYALVL ESIGKPSSLV PFMMPKRIAE
TPADKPIPEQ IGSGPFKFVA SEFQPGVKAV YVKNPDYIPR KEAPDWTSGG KVVKVDRVEW
ITMPDAQTAV NALQSGDIDF IENPSFDLLP VLAQDKELTI DTLSPLGFQT LGRMNFLHPP
FDNPKVRRAA FLAMSQKPVL DALVGNPKYY KICGAVFGCG TPLETDVGSE TLVKGNGMAE
AKKLLAESGY DGTPIALMAP GDVVTLKAQP IVAAQLLRDA GFKVDVQATD WQTVVSRRAS
QKPPSEGGWN MFFTNWAGPD ILNPVANVSV GGQGKKGGWF GWAEDAKVEE LRDKFVRANS
PDEQKKIAEE IQKEVYEQVI YIPLGQYTAP SVWRKELSGI VHGPATPVFW NIDKQGD
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