| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1410 |
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| Symbol | |
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| ID | 6409067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1487818 |
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| End bp | 1488948 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711309 |
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| Product | carboxypeptidase |
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| Protein accession | YP_001990425 |
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| Protein GI | 192289820 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.212173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCAG CAAATCTCCC ATTCGATTCC GATACGATGC TGCAAGGCCT GCGCGCCTGG
GTTGAATGTG AGAGCCCGAC CTGGGACACC GCCGCGGTGG AGCGCATGCT CGATCTTGCA
GCGCGGGAGA TGGCGATCAT GGGCGCGACA ATCGAGCGCA TCGCCGGCCG CCAGGGTTTC
GCCGGTTGTG TCCGCGCGCG CTTTCCGCAT CCCAAGCAAG GCGAGCCCGG CATCCTGATC
GCCGGTCATC TCGACACCGT GCATCCGGTC GGCACGCTGT CGAAGCTGCC GTTCCGCCGC
GAGGGCAACA AGGCGTTCGG CCCCGGCATC TTCGACATGA AGGGCGGTAA CTACCTGACG
CTGGAAGCGA TCAAGCAGCT CGCGCGCGCG TCGTTCACGA CGCCGCTGCC GATCACGGTG
CTGTTCACGC CCGACGAAGA AGTCGGGACG CCGTCGACCC GTGACATCAT CGAAGCCGAA
GCGGCGCGCA ACAAATACGT GCTGGTGCCG GAGCCCGGCC GCCCAGACAA CGGCGTCGTC
ACCGGCCGCT ACGCGATCGC GCGATTCAAC CTGGAGGCGA TCGGCAAACC GAGCCACGCC
GGCGCGACGT TGTCGTCAGG CCGTTCCGCG ATACGGGAAA TGGCCAAGCA GATTCTGGCG
ATCGATGCGA TGACCACGGA AGACTGCACC TTCAGCGTCG GCATCGTCCA CGGCGGCCAA
TGGGTGAATT GCGTCGCCAC CACCTGCACC GGCGAAGCGC TCAGCATGGC CAAGCGCCAG
GCAGACCTCG ACCGCGGCGT CGACCGCATG CTGGCGCTGA GCGGCAGCAG CAGTGACGTC
ACCTTCAAGG TGACGCGCGG CGTCACCCGC CCGGTGTGGG AGCCGGATGC CGGCACCATG
GCGCTTTACG AAAAGGCCCG CGCGGTCGCG TCCCAGCTCG GTGTCAGCCT GCCGCACGGC
AGCGCCGGCG GCGGCTCCGA CGGCAACTTC ACCGGCGCGA TGGGCATTCC GACGCTTGAT
GGCCTCGGTG TGCGCGGCGC AGACGCGCAC ACGCTGAACG AGCACATCGA GGTCGACAGC
CTCGCCGAGC GCGGTCGGCT GATGGCGGGC CTGCTCGCAA CGCTGGAGTG A
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| Protein sequence | MNPANLPFDS DTMLQGLRAW VECESPTWDT AAVERMLDLA AREMAIMGAT IERIAGRQGF
AGCVRARFPH PKQGEPGILI AGHLDTVHPV GTLSKLPFRR EGNKAFGPGI FDMKGGNYLT
LEAIKQLARA SFTTPLPITV LFTPDEEVGT PSTRDIIEAE AARNKYVLVP EPGRPDNGVV
TGRYAIARFN LEAIGKPSHA GATLSSGRSA IREMAKQILA IDAMTTEDCT FSVGIVHGGQ
WVNCVATTCT GEALSMAKRQ ADLDRGVDRM LALSGSSSDV TFKVTRGVTR PVWEPDAGTM
ALYEKARAVA SQLGVSLPHG SAGGGSDGNF TGAMGIPTLD GLGVRGADAH TLNEHIEVDS
LAERGRLMAG LLATLE
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