| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1407 |
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| Symbol | |
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| ID | 6409064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1484047 |
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| End bp | 1485699 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711306 |
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| Product | ABC transporter related |
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| Protein accession | YP_001990422 |
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| Protein GI | 192289817 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.288538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATA ACGTCCTCGA AATCGACAAC CTCGTCGTCC GCCTCGGCCG CAGCGGGCAT
GGCGACAAGG TGATCGACGG CATCTCACTC AACGTGCGGG CCGGCGAGAC GATGTGTCTG
GTCGGCGAGA GCGGCTCAGG CAAATCGGTG ACGTCACTCA CGACCATGGG ACTGCTGCCG
AAGGGCGTGC TGCAAGCGTC CAGCGGCGAG ATCCGGCTGG CCGGCGAGAA CGTGTTGGCG
GCCAGCGAGC GGCGGCTGCG CCAACTCCGT GCTTCGCGGA TGGCGATGAT CTTTCAGGAG
CCGATGACGG CGCTGAATCC TGTGGTGCCG GTCGGCAAAC AGATCGACGA GGTGCTGCGC
TTCCACACCG ACCTGCCCGC GCGCGAACGC CGCCGCCGCA TCCTCGACAT GATGCAGCAG
GTGCGGCTGC CGGATGTCGA ACGGATCTTC GCATCCTATC CGCACCGGCT ATCGGGCGGT
CAGCGTCAGC GCATCATGAT CGCGATGGCG CTGGTGCTCG AACCGAAACT GCTGATCGCC
GACGAGCCAA CCACGGCGCT CGACGTCACC ACGCAAAAGC AAATCCTGAC GCTAATCCGC
GAGCTGCAGC AGGCGCACGG CACCGCGGTG CTGTTCATCA CCCACGACAT GGGCGTGGTC
GCCGAGATCG CCGACCGCGT CGCGGTGATG CGGCAGGGCC GGCTGGTCGA GACCGGTCCG
CTGGAGGCGG TGCTACGCCG CCCGCAGATG GAGTACACCC GCAATCTGTT GTCGGCGGTC
CCGAGCCTGG TGCCGCGGGC GCCGCGCCCT GCGAACCGCA CGCCGGTCGT GCTGGAAGCC
AACGAGCTCG GCAAGGTGTA TCGCGAACGC TCGTTGCTCG GCCGTCACCG CGAGGTGGTG
GCGGCGCAGG ACGTGACGCT GACGCTGCAC AAGGGCCGCA CCCTCGGCAT CGTCGGCGAA
AGCGGCTCGG GCAAGTCCAC CGTGGCGCGC TGCATCGTCC GGCTGATCGA TCCGACCTCG
GGGGGCATCC GGCTCGCCGG CCGCGAGATA TCCGAGCTGT CGCGCCGGTT GCTGCGGCCG
CATCGGCAGA AGATCCAGAT CATCTTTCAG GACCCGTATC GCTCGCTCAA TCCGCGCGTC
AGCGTTGGTG AGAGCATCGC CGAGGGACCG ATCAATTACG GCATGCCGCG CGCCCAGGCG
ATGGCCAAGG CACGGCAGTT GCTCGAACTG GTGCATCTGC CGGCGGATGC GATCTCGCGC
TTCCCGCATC AGTTCTCCGG CGGTCAGCGC CAGCGCATTG CGATCGCCCG CGCGCTCGCG
CTCGATCCCG ACGTGCTGGT CGCGGACGAA GCGGTGTCGG CGCTCGACGT TTCGGTGCAG
GCGCAGGTGC TGAATCTGCT CGACGAGATC CAGACCCGGC TCGGCATCGC GCTGTTGTTC
ATCACCCACG ATCTGCGCGT CGCGGCGCAG ATCTGCGACG ACGTCGCAGT GATGGAAAAA
GGCCGCGTCG TCGAACAGGG ACCCGCCGCC GAAGTGCTGA CCCACCCCAA GCAAGCCTAC
ACCCGCCAAC TGCTCGAAGC CGCTCCCGGC CGGCATTGGG ACTTCGCCAA TTTCCGTCCG
GTCCAAGAGG CACCGCAGGC GGCGGTGAGT TGA
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| Protein sequence | MTDNVLEIDN LVVRLGRSGH GDKVIDGISL NVRAGETMCL VGESGSGKSV TSLTTMGLLP
KGVLQASSGE IRLAGENVLA ASERRLRQLR ASRMAMIFQE PMTALNPVVP VGKQIDEVLR
FHTDLPARER RRRILDMMQQ VRLPDVERIF ASYPHRLSGG QRQRIMIAMA LVLEPKLLIA
DEPTTALDVT TQKQILTLIR ELQQAHGTAV LFITHDMGVV AEIADRVAVM RQGRLVETGP
LEAVLRRPQM EYTRNLLSAV PSLVPRAPRP ANRTPVVLEA NELGKVYRER SLLGRHREVV
AAQDVTLTLH KGRTLGIVGE SGSGKSTVAR CIVRLIDPTS GGIRLAGREI SELSRRLLRP
HRQKIQIIFQ DPYRSLNPRV SVGESIAEGP INYGMPRAQA MAKARQLLEL VHLPADAISR
FPHQFSGGQR QRIAIARALA LDPDVLVADE AVSALDVSVQ AQVLNLLDEI QTRLGIALLF
ITHDLRVAAQ ICDDVAVMEK GRVVEQGPAA EVLTHPKQAY TRQLLEAAPG RHWDFANFRP
VQEAPQAAVS
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