| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1385 |
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| Symbol | |
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| ID | 6409042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1458433 |
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| End bp | 1460499 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642711284 |
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| Product | cytochrome c1 |
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| Protein accession | YP_001990400 |
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| Protein GI | 192289795 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1290] Cytochrome b subunit of the bc complex
[COG2857] Cytochrome c1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGAC CCTCGACCTA TCAGCCACAA AGCCCCTTGA TGAAGTGGCT GGAGCAGCGC
CTGCCGATCG CGGGCCTCGT TCATTCCTCC TTCATCGCCT ACCCGACGCC GCGTAACCTG
AACTACTGGT GGACGTTCGG TGCCATCCTG TCGATGATGC TGGCGGTGCA GATCGTCACC
GGCATCGTGC TGGCGATGCA CTACACGCCG CACGTCGATC TCGCCTTCGA CTCGGTCGAG
CGGATCGTTC GCGACGTCAA CTACGGCTGG CTGCTGCGCA ACATGCATGC CGCCGGCGCG
TCGATGTTCT TCATCGCCGT CTACGTCCAC ATGCTCCGCG GTCTGTACTA CGGCTCGTAC
AAGGCGCCGC GCGAAGTGTT GTGGATCCTC GGCGTCATCA TCTACCTGCT GATGATGGCG
ACCGGCTTCA TGGGTTACGT GCTGCCGTGG GGCCAGATGA GCTTCTGGGG CGCCACCGTG
ATCACCAACC TGTTCTCGGC GTTCCCGATC GTCGGCGACA GCATCGTGAC GCTGCTGTGG
GGCGGCTATT CGGTCGGCAA CCCGACCCTG AATCGCTTCT TCTCGCTGCA CTACCTGCTG
CCGTTCGTGA TCGCCGGCGT GGTCGTGCTG CACGTCTGGG CGCTGCACGT CACCGGCCAG
AACAACCCGG CTGGCGTCGA GCCGAAGACC GAGAAGGACA CCGTTCCGTT CACGCCTTAC
GCGACCCTCA AGGACGTGTT CGGCATGTCG TGCTTCCTGG TGTTCTACTC CTGGTTCATC
TTCTACATGC CGAACTACCT CGGCGACGCG GAGAATTACG TTCCGGCCAA CCCGGGCGTG
ACCCCGCCGC ACATCGTGCC GGAATGGTAC TACCTGCCGT TCTACGCGAT CCTGCGTTCG
ATCCCGAACA AGCTGATGGG CGTCATCGCG ATGTTCGGTG CGATCATCGT GCTGCTGTTC
CTGCCCTGGC TCGACAGCTG CAAGGTGCGC TCGTCCCGCT ATCGGCCGAT GGCCAAGCGC
TTCTTCTGGG CCTTCGTGGT GACCTGCCTG GTGCTCGGCT GGCTCGGCTC GAAGCCTGCG
GAAGGCATCT ACACCACGCT CGGTCAGGTG TTCACCTTCT TCTACTTCGC CTACTTCCTG
ATCGTGCTCC CGGTGCTGGG TCGTATGGAA AAGACTCTGC CGCTGCCGAA CTCGATCGCC
GAAGACGTGC TCAACAAGGG CAAGGTCGCC AAGGCCGTTG CCGGGCTGGT GGCGGTGCTG
TTCGCAGGCG GCCTGATGGT CGGCGGCGTG CAGCCGGCCA AGGCCAACGA AGGTGGCGAG
AACCCGCCGT CGCTGCAGTG GAGCTTTGCG GGTCCGTTCG GCACCTACGA TCGCGCCCAG
CTGCAGCGTG GCTTCAAGAT CTACAAGGAA GTCTGCTCCA ACTGCCACTC GCTGAAGCTG
TTGCAGTATC GCAACCTCGC CGAGCCGGGT GGCCCGGGCT TCACCGTGGA GCAGGCCAAG
GAGATCGCGG CTGCTGCGCA GATCAAGGAC GGTCCGAACG ACCAGGGTGA GATGTTCGAG
CGTCCCGGCC GGCTCGCCGA CACCTTCCAC TCGCCGTTCC CGAACGAGCA GGCTGCCCGT
GCGGCCAACG GTGGTGCGGC TCCGCCGGAC ATGTCGCTGC TGGCCAAGGC GCGCACCTAT
CCGCGTGGCT TCCCGCAGTT CATCTTCGAC TTCTTCACCC AGTTCCAGGA GCAGGGCCCG
AACTACATCG CCGCGCTGCT GCAGGGCTAC GAAGACACCC CGCCGGAAGG CTTCAGTCTC
CCGGACGGCT CGTTCTACAA CAAGTGGTAT CCGGGCCACT CGATCAAGAT GCCGCCGCCG
ATCCAGGCCG GCATGGTCAG CTACGACGAC GGCACCCCGG AGACCCTCGA GCAGTACGCC
AAGGACATCT CGACGTTCCT GGTGTGGGCT TCCGAGCCGC ACATGGAGGC CCGCAAGCGC
CTCGGTCTGC AGGTGATGAT CTTCTTGGTC ATCCTTTCCA GCCTGCTGTA CTTCGTGAAG
CGCAAGGTGT GGTCGAACGT CCACTAA
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| Protein sequence | MSGPSTYQPQ SPLMKWLEQR LPIAGLVHSS FIAYPTPRNL NYWWTFGAIL SMMLAVQIVT
GIVLAMHYTP HVDLAFDSVE RIVRDVNYGW LLRNMHAAGA SMFFIAVYVH MLRGLYYGSY
KAPREVLWIL GVIIYLLMMA TGFMGYVLPW GQMSFWGATV ITNLFSAFPI VGDSIVTLLW
GGYSVGNPTL NRFFSLHYLL PFVIAGVVVL HVWALHVTGQ NNPAGVEPKT EKDTVPFTPY
ATLKDVFGMS CFLVFYSWFI FYMPNYLGDA ENYVPANPGV TPPHIVPEWY YLPFYAILRS
IPNKLMGVIA MFGAIIVLLF LPWLDSCKVR SSRYRPMAKR FFWAFVVTCL VLGWLGSKPA
EGIYTTLGQV FTFFYFAYFL IVLPVLGRME KTLPLPNSIA EDVLNKGKVA KAVAGLVAVL
FAGGLMVGGV QPAKANEGGE NPPSLQWSFA GPFGTYDRAQ LQRGFKIYKE VCSNCHSLKL
LQYRNLAEPG GPGFTVEQAK EIAAAAQIKD GPNDQGEMFE RPGRLADTFH SPFPNEQAAR
AANGGAAPPD MSLLAKARTY PRGFPQFIFD FFTQFQEQGP NYIAALLQGY EDTPPEGFSL
PDGSFYNKWY PGHSIKMPPP IQAGMVSYDD GTPETLEQYA KDISTFLVWA SEPHMEARKR
LGLQVMIFLV ILSSLLYFVK RKVWSNVH
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