| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1380 |
|---|
| Symbol | |
|---|
| ID | 6409037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 1454799 |
|---|
| End bp | 1456055 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642711279 |
|---|
| Product | Polynucleotide adenylyltransferase region |
|---|
| Protein accession | YP_001990395 |
|---|
| Protein GI | 192289790 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.26056 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA TGCCAGTGCG CAGCGATGCG CCGTGGCTAC ACACGGGACC GGCGGCGCGG
GTGCTCGCGC TGCTGAACGG CGACGGAGAA GAGGCGCGGG TGGTCGGTGG CGCCGTGCGC
AACGCGTTGC TCGGCGAGCC GATCGGCGAT GTCGACATCG CCACCACCGC ACTGCCCGAC
GAAGTGATCC GCCGCGCCAA GGCCGGCGGT ATCAAGGCGG TGCCCACCGG GATCGAGCAC
GGCACCGTGA CGCTGGTGGT CGAAGGCCAC GGTTTCGAAA TCACCACGCT GCGCGAAGAC
GTCGAGACCT TCGGCCGTAA GGCCAAGGTG GCGTTCGGCC GAGATTGGGA GCGCGACGCG
CAGCGCCGCG ACTTCACCAT CAACGCTCTG TCGATGTCGG CCGACGGGAC GGTGCACGAC
TACGTCGGTG GCCTCGTCGA CATCGCGGCG CGCCGCGTGC GGTTCATCGG CGATCCGGAC
CAGCGCATCG CCGAGGATTA CTTGCGCATC CTGCGGTTCT TCCGCATCCA CGCCGCCTAC
GGGGCCGGCG AGCCGGATCG CGACGCGTAT TTGGCCTGCA TCCGCGGCCG CGGCGGTCTT
GCCGCGTTGT CGGCGGAGCG GCAGCGGATG GAGATGTTGA AGCTGATGAT CGCGGGCGGC
GCCGAAGCCT CGGTGGTGGC GATGGCCGAT GGTGGGCTGC TGCTCGCGGT GCTTGGCGGT
GTCGCTTATC TCGGTGCCTT TGCGGCGATG ATCGGCGCAG AACGTGCGCT CGGGCTTGAG
GCCGATCCGG TGCGACGGCT CGGCGCGTTG GCCGTGGCTG TCACCGAGGA TGCCAAGCGG
CTGGCCCTGC GGCTGCGGCT GTCGAACGTC GAAGCCAAGC GGCTCGACTC GATGGGCCAC
CGCTGGTGGC GGCTTGCCGG CATGGACGAA GCGACCGCGC GGCGGCGGCT ATATCGGCTC
GGCGAAGCGC GGTTTCACGA CCGCATGATG CTGGCTTGGG CGCGCGCCGG TCGCGGCGCC
GATCCGGCGC CGTGGCGCCA ACTGATCGCG CTGCCGCAGC GCTGGCAGGC GCCGACCTTC
CCACTCAAGG CCGCAGATTT CCTCGCCCGC GGCTTCGCGG CGGGGCCGGC GCTCGGCCAC
GTGCTGACGC TGGCTGAAGA TGCTTGGCTA GCGGCCGATT TCCCACTCGA CCCGGCCGCG
CTCCGCACCA TCGCCGATCA GACCGCGGCA CGCTTCGCAC GCGATCATCT GCTGTAG
|
|---|
| Protein sequence | MTDMPVRSDA PWLHTGPAAR VLALLNGDGE EARVVGGAVR NALLGEPIGD VDIATTALPD
EVIRRAKAGG IKAVPTGIEH GTVTLVVEGH GFEITTLRED VETFGRKAKV AFGRDWERDA
QRRDFTINAL SMSADGTVHD YVGGLVDIAA RRVRFIGDPD QRIAEDYLRI LRFFRIHAAY
GAGEPDRDAY LACIRGRGGL AALSAERQRM EMLKLMIAGG AEASVVAMAD GGLLLAVLGG
VAYLGAFAAM IGAERALGLE ADPVRRLGAL AVAVTEDAKR LALRLRLSNV EAKRLDSMGH
RWWRLAGMDE ATARRRLYRL GEARFHDRMM LAWARAGRGA DPAPWRQLIA LPQRWQAPTF
PLKAADFLAR GFAAGPALGH VLTLAEDAWL AADFPLDPAA LRTIADQTAA RFARDHLL
|
|---|
| |