| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1378 |
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| Symbol | |
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| ID | 6409035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1453865 |
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| End bp | 1454542 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711277 |
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| Product | NUDIX hydrolase |
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| Protein accession | YP_001990393 |
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| Protein GI | 192289788 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.441727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGACCGGAC CGATGACGGG AACGCAGTCT GCCAGCGGGA GCATCAGTTC GGCGGACTTC
TTCGATCGCG CCCAGCGGCG GCTGCGATTC GACGTGCCGG CGGCGCTCAC CGACGCCGGG
GTGATTCCCG CCACCGGCGA TCAGGGCAAT GATCAGATGC TGCGCACCAT CGCGCAGGAA
CGGCCGATCC GTCCCGCTGC GGTGCTGATT CCGGTGGTCG AGCACGCCGA GCCGACCGTG
CTGCTGACGA TGCGGGCCGC GCATCTCAAC GATCACGCCG GCCAGATCGC GTTTCCCGGC
GGCAAGATCG ACGCCACCGA CAATTCGCCG CTCGATGCCG CCTTGCGCGA GGCCGAGGAA
GAGATCGGGC TCGATCGTTC CTATGTCGAG CCGATCGGCT ATCTCGATGT CTATGGCACC
AGTTTCGGTT TCCGGATTTT GCCGACGGTG GCGCGGGTGC GTCCCGGCTT TGAACTCGCC
ATCAACAAGT CCGAAGTCGA CGACGCCTTC GAAGTGCCGC TCGCGTTCCT GATGGACCCC
GGAAATCATC AATTGCACAG CAAGGAATTT CGCGGCGCGC AGCGGTCCTA CTACGCGATG
CCGTTCGCCG AGCGCTACAT CTGGGGGGCG ACGGCGGGCA TTCTGCGCGC GCTGTACGAA
CGGGTCTGCC TGCCATGA
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| Protein sequence | MTGPMTGTQS ASGSISSADF FDRAQRRLRF DVPAALTDAG VIPATGDQGN DQMLRTIAQE
RPIRPAAVLI PVVEHAEPTV LLTMRAAHLN DHAGQIAFPG GKIDATDNSP LDAALREAEE
EIGLDRSYVE PIGYLDVYGT SFGFRILPTV ARVRPGFELA INKSEVDDAF EVPLAFLMDP
GNHQLHSKEF RGAQRSYYAM PFAERYIWGA TAGILRALYE RVCLP
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