Gene Rpal_1377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1377 
Symbol 
ID6409034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1453257 
End bp1453868 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content64% 
IMG OID642711276 
Productprotein of unknown function DUF1285 
Protein accessionYP_001990392 
Protein GI192289787 
COG category[S] Function unknown 
COG ID[COG3816] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.418757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGC AAGGGCAGAG TTCACCGCAC AATCTCGACG GCCTCACCGA GGCCGCGCGG 
GAGGCCGCGG CGAGCGCCGC CAAGGGCAAG GGCTTGCCGC CCGTGCATCT TTGGAACCCG 
CCGTTCTGCG GCGATCTCGA CATGCGCATC GCTTCGGACG GAACCTGGTT CTATCTCGGC 
ACGCCGATCG GCCGCCCCGC TTTGGTGCGG CTGTTCTCGA CCATTCTGAA GCGCGAGGGC 
GACAAGCACT TCCTGGTGAC CCCGGTCGAG AAGGTCGGCA TCAAGGTCGA CGATGCGCCG 
TTTCTCGCGG TCGAAATGGT CAAGGATGCG GACGAGCGCG GGGCCTTGCT GCGCTTCCGC 
ACCAATGTCG ACGACTGGGT GACATGTGAT GCCGACCACC GGCTGCGGTT CGAAGTTGCC 
GAAGACGGCG GAGTGACACC GTACCTTCAC GTGCGTGCCG ATCTGTGGGC CAAGGTGACG 
CGGGCGGTGT ATTACGATCT GGTTGACATC GGTGAGGAGC GAGTGGTCGA TGGTCGCTCG 
ATGTTCGGCA TTGCGTCCGG CGGCACGTTC TTCGCCATGG CCGATGCCGA GCTGATGAGG 
GAAGCGCATT GA
 
Protein sequence
MAKQGQSSPH NLDGLTEAAR EAAASAAKGK GLPPVHLWNP PFCGDLDMRI ASDGTWFYLG 
TPIGRPALVR LFSTILKREG DKHFLVTPVE KVGIKVDDAP FLAVEMVKDA DERGALLRFR 
TNVDDWVTCD ADHRLRFEVA EDGGVTPYLH VRADLWAKVT RAVYYDLVDI GEERVVDGRS 
MFGIASGGTF FAMADAELMR EAH