| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1371 |
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| Symbol | |
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| ID | 6409028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1443571 |
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| End bp | 1445136 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642711270 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001990386 |
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| Protein GI | 192289781 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.377375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGCA TCTCGACCAT TTTCATCGCC GTCTGCATGG TGCTGATCGC CACCTCGCTC
GGCATGGTGG TGTATGCGGT CGCCGGATTT AACTTCGCCC AGGCGTCACT GGTCGGCCTG
ACCGCACTGA CATTGTTCGT GCTGTACCAG GCGGTTTCGA TGCGGATGCG CGACCGCGCC
GAGGCCGGCG ATCAGATCGC CGACCTGTCG CGCGGTACCG CCGATCTCGC CCGCCAGGTC
GGCGAATTCG GCCGGCGGCT GGCGGTGGTC GAGGCCAAGC TGGTTTCCGC CCGGTCGTCG
CAGCAGGACC GGGTCCAGCA CGTCTCCGAC GAAATCACCG AGCTCGGTAC TCTGGTGCAG
CAGCTTGCTG CTTCCGTGGC TGCCCACGAA GACCTTCTGA CCTCCGCCGC CCACAGCGTG
GTCCGCCCGG AGGCGATCGC GGCGCCGGAA CCTGCCACTC TGGCACCGGC AGCGATCCCG
ACCGCGGCAG CGCCGGCGAT TCCCGCTCCC GCAGTCGTGC CGCCATCGGT GCCCCAGCCC
GAAACGCCGA CCGTCGCAGT TGCGCCAGCG CCGGCCGCTT CGACGGTCTC CGCTCCTATG
GTTGCGACAC CCGAGGCCGC TTCAGTTCCG GCTTTGGCTG CGGCGTCTGC CGCTGTCACT
GCGCCCGCCG GTCCCAATCT GGCGGCAGCG GTAGCGAGCG CCGTCGATGG CGGCCGCTTC
GATCTTTATC TGCAGCCGAT GGTCTCGCTG CCGCAGCGCA AGGTGCGCGC CTACGAGGTG
GTGACGCGTC TGCGGGACAA CGCCGATCAG GCGATCCCTG CCGAAACCTA CCTGCCGATC
GCCGAGACGG CCGGACTGAT GGGGCGGATC GACAACGCCA TCCTGCTGCG CGCCGTTCAG
GTGGTCCGTC GGCTGTTGGT GCGCAACAAG GACGTCGGGC TGTTCGTCAA CATCGCCGGC
GCGACGCTGT CCGACAAGGC CGCCTTCGCC CAGTGTCTCG ACTTCCTCGA GGCCAATCGC
GCGCTGGCGC CGTCGCTGAT CCTTGAATTC AAGCAGAGCG CGTTGCGCGG CCTCGGCCCG
ATCGAAACCG AGCATCTTGC GGCGCTGGCG CAGCGCGGCT TCCGGTTCTC GATCGACCAC
GTCACCGATC TGCGGTTCGA GCCCCGCGAG CTGGCCGATC GCGGCGTCCG CTTCATCAAG
GTGCCGGCGT CGCTGCTGCT TGCCGCGCAC GACACCGCGT CGGCCGACAT CCATCCGGTG
GATCTGTCCG ATCTGCTCGG CCGCTTCGGC ATCGATCTGA TCGCCGAGCG GATCGAGGGC
GAACGCGCGG TGGTCGACCT GCTTGACTAC GATGTTCGGT TTGGGCAGGG GTTCTTGTTC
GCAGCGCCCC GTCCGCTGCG GCCAGAGACC GCCACCAACG CGGCCGCGCC GGCTTCCAAC
GCCCCGGCCC AGCAGGAAAT CAATCTTGAT CCAGGCAAGC TACCGCAGAG CCCGCTCGCT
CGCATCGAGC CGGCACGCGT CACCGGCAAT GCCGCACTGG TTCGCCGCGC CGCCGGCCCG
TTCTGA
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| Protein sequence | MIRISTIFIA VCMVLIATSL GMVVYAVAGF NFAQASLVGL TALTLFVLYQ AVSMRMRDRA
EAGDQIADLS RGTADLARQV GEFGRRLAVV EAKLVSARSS QQDRVQHVSD EITELGTLVQ
QLAASVAAHE DLLTSAAHSV VRPEAIAAPE PATLAPAAIP TAAAPAIPAP AVVPPSVPQP
ETPTVAVAPA PAASTVSAPM VATPEAASVP ALAAASAAVT APAGPNLAAA VASAVDGGRF
DLYLQPMVSL PQRKVRAYEV VTRLRDNADQ AIPAETYLPI AETAGLMGRI DNAILLRAVQ
VVRRLLVRNK DVGLFVNIAG ATLSDKAAFA QCLDFLEANR ALAPSLILEF KQSALRGLGP
IETEHLAALA QRGFRFSIDH VTDLRFEPRE LADRGVRFIK VPASLLLAAH DTASADIHPV
DLSDLLGRFG IDLIAERIEG ERAVVDLLDY DVRFGQGFLF AAPRPLRPET ATNAAAPASN
APAQQEINLD PGKLPQSPLA RIEPARVTGN AALVRRAAGP F
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