| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1369 |
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| Symbol | hisS |
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| ID | 6409026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1440384 |
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| End bp | 1441913 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642711268 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_001990384 |
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| Protein GI | 192289779 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0999423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAGA AACCGAAAAA ACCGCAGAAA CTGCGCGCCC GGCTGCCGCG GGGCCTCGCC
GATCGTGGCC CTGCCGAAAT CGCGGCGACG CGCGCGATGG TGGAGAAGAT CCGCGAGGTG
TACGAACGCT ACGGCTTCGA GCCGGTGGAG ACCCCGGCGT TCGAATACAC TGACGCGCTC
GGCAAGTTCC TGCCCGATCA GGACCGTCCC AACGAGGGCG TGTTCTCGCT GCAGGACGAC
GACGAGCAGT GGATCAGCCT GCGCTACGAT CTCACCGCAC CGCTGGCGCG CTACGTCGCC
GAGAACTTCG ATCAGCTCCC GAAGCCATAT CGCAGCTATC GGTTCGGCTG GGTATTCCGC
AACGAGAAGC CCGGCCCCGG CCGCTTCCGG CAGTTCATGC AGTTCGACGC CGACACCGTC
GGCTCCGGCT CGCCCGCCGC CGACGCCGAA ATGTGCATGA TGGCCGCCGA CACCATGGAA
GCGCTCGGCA TCCCGCGCGG CAGCTATCTC GTAAAGCTGA ATAATCGAAA GATTCTGGAC
GGCGTTCTCG AAGCGATTGG CATTGGTGGC GATGAACACA TTAAGCAGAG GCTAGTCGTC
CTCCGTGCGA TCGACAAATT GGATCGCTTG GGCCTGCAAG GTGTGGAACA GCTTCTTGGT
GAAGGGCGGA AGGACGAGAG CGGCGACTTC ACAAGAGGAG CCTCGTTAAA CGCTGGCCAG
ATAAGGGACG TCATCACCCT GCTAAACTTC GCTGGTTGGG GGGACATCGT AGACGGTTCG
AATACGCACA CTCTCGATGA ATGGGAGGGG TTGCGCTTTT CAGTGAACTC AACCTTCTCT
GCAGGCATTC AGGATCTACG CCAGATTACG AAGATCACAG AGGCCTCGGG CTACGACACT
GGCCGAATTC GAGTTGATAA CACTGTCGTC CGCGGCCTTG AGTACTACAC CGGGCCCGTA
TTCGAGGTCG AACTGCTGCT CGATACCAAG GATGAGAAGG GCCGCCCGGT GCGGTTCGGC
TCGGTCGGCG GCGGCGGGCG CTATGACGGC CTGGTGTCGC GCTTCCGCGG CGAGCCGGTG
CCGGCGACCG GGTTCTCGAT CGGCGTGTCG CGGCTGCAGG CGGCGCTGAC GCTGATCGGC
CAGCTCGGCA ACAAGCCGCA GGCCGGCCCC GTCGTCGTCA CCGTGTTCGG CGGCGAGATC
GCGGGCTACC AGAAGATGGT CGCCACCTTG CGCAAAGCCG GCATCCGGGC GGAATTGTAC
TTGGGCAATC CCAAGCACTC GCTCGGCCAG CAGATGAAAT ACGCCGACAA GCGCAACTCG
CCCTGCGCCA TCATCCAGGG CTCGGACGAG AAGCAGCAGG GCATCGTGCA GATCAAGGAC
CTGATCCTGG GCGCCGAACT GGCGTCGCTG GAGAAGGACC GCGACGAGTA TTTGAAGAAG
CAGGCCGAAG CGCAGTTCTC CTGCAAGGAA GATGAAATGG TCGCCAAGGT GCAGGAGCTG
CTGCAGCGCC GCGGGGTGGC GTGGGGATAG
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| Protein sequence | MAEKPKKPQK LRARLPRGLA DRGPAEIAAT RAMVEKIREV YERYGFEPVE TPAFEYTDAL
GKFLPDQDRP NEGVFSLQDD DEQWISLRYD LTAPLARYVA ENFDQLPKPY RSYRFGWVFR
NEKPGPGRFR QFMQFDADTV GSGSPAADAE MCMMAADTME ALGIPRGSYL VKLNNRKILD
GVLEAIGIGG DEHIKQRLVV LRAIDKLDRL GLQGVEQLLG EGRKDESGDF TRGASLNAGQ
IRDVITLLNF AGWGDIVDGS NTHTLDEWEG LRFSVNSTFS AGIQDLRQIT KITEASGYDT
GRIRVDNTVV RGLEYYTGPV FEVELLLDTK DEKGRPVRFG SVGGGGRYDG LVSRFRGEPV
PATGFSIGVS RLQAALTLIG QLGNKPQAGP VVVTVFGGEI AGYQKMVATL RKAGIRAELY
LGNPKHSLGQ QMKYADKRNS PCAIIQGSDE KQQGIVQIKD LILGAELASL EKDRDEYLKK
QAEAQFSCKE DEMVAKVQEL LQRRGVAWG
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