| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1365 |
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| Symbol | |
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| ID | 6409022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1437847 |
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| End bp | 1438704 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642711264 |
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| Product | protein of unknown function DUF519 |
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| Protein accession | YP_001990380 |
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| Protein GI | 192289775 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2961] Protein involved in catabolism of external DNA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.674549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTATC GCCACGCTTT CCACGCCGGA AATTTCGCCG ACGTCATCAA ACACCTCGTG
CTGGTCCGCA TCCTGACGTA CCTGCACGAC AAGCCGGCCG CCTTCAGGGT GGTCGATACC
CACGCCGGTG CCGGCCTGTA CGACCTGACC AGCGAGGAGG CCCGCAGGGG CGGCGAATGG
GCGACCGGGA TCGCCCGGGT GCTGCAGGCG CGGTTTTCCG ACGAGGCCTA CGCGCTGATC
GCGCCCTATC TCGATATCGT CCGGGCGTTC AACCCGCAGC GCGACATGAC CGCCTACCCA
GGCTCGCCGC TGATCGCCCG CGCCCTGCTC CGCCCCCAGG ACAGCCTGGT GGCCTGCGAG
CTCGAGCCGG TGGCGCGCAA GCAGCTGATC GCGGCGCTGC GCCACGACCC GCAGGGCCGG
GTGGTGGATC TCGACGGCTG GACCGGACTC ACCGCTTACG TGCCGCCGAA GGAGCGGCGC
GGGCTGGTGC TGATCGACCC GCCATTCGAA CGCAAGGACG AGTTCGAGCA GATGGCCGCC
AAGTTCGCCG CCGCCCACGC CAAGTGGCCG ACCGGCGTGT ATCTGCTGTG GTACCCGGTC
AAGAACCGCC GCGCCACCGA GGCGCTGGCC GCTGCCGTGG CCGAGACTGC CGCCGCGGGC
GGCGAAGGCA AGTGCCTGCG GCTGGAGTTC AGCGTCGCGC CGCAGCAGTC GGATGGGCCG
CTGACATCGA CCGGGCTGCT GATCGTCAAT CCGCCCTGGA CGCTGGCCGA TGAACTGAGA
ACCGTTCTCC CCGAGCTGGA GCGTCCGCTC GGCCTCGGTG GGGTCGGTCG TTACCGCCTC
GAATTCCCGA AGTCCTGA
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| Protein sequence | MNYRHAFHAG NFADVIKHLV LVRILTYLHD KPAAFRVVDT HAGAGLYDLT SEEARRGGEW
ATGIARVLQA RFSDEAYALI APYLDIVRAF NPQRDMTAYP GSPLIARALL RPQDSLVACE
LEPVARKQLI AALRHDPQGR VVDLDGWTGL TAYVPPKERR GLVLIDPPFE RKDEFEQMAA
KFAAAHAKWP TGVYLLWYPV KNRRATEALA AAVAETAAAG GEGKCLRLEF SVAPQQSDGP
LTSTGLLIVN PPWTLADELR TVLPELERPL GLGGVGRYRL EFPKS
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