Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1362 |
Symbol | uvrC |
ID | 6409019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1433891 |
End bp | 1436005 |
Gene Length | 2115 bp |
Protein Length | 704 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642711261 |
Product | excinuclease ABC subunit C |
Protein accession | YP_001990377 |
Protein GI | 192289772 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCATG ATCCCGCCGA GCCGCCTGCG GCCGCGGCCG AACCACCGCT CGACACGGCC TCCCCTGACG GCGCTGCGCC CGTCGCGGAC ACGCGCCCGG CTGCGGGCAA CCAGGACATC GACGCGGCGA CCGCCTCGCT TGCGGTCGAG GAGGACGACG AGGCGCGGCT GCCGGAGGTG GAGGACGAGC AGGAAGCTGA GCCGGCGCAG GCCGGTGCCG GGCCGATGGC GGTGGGCCGG TCGGCGATCG CGCGCGCGGT GCGGCTCGCC CCGACCTCAC CTGGCGTCTA CCGGATGCTG AACGCCGAGC GCGACGTGCT CTACGTCGGT AAGGCCAAGA ATGTGAAGAA GCGGCTGGCG TCCTACGCCC GCCCCACAGG CCAGGTGCTG CGGATCGCAC GGATGATCGC GCTCACCGTC GAGGTCGAGG TGATCTCCAC CACGACCGAG ACTGAGGCGC TGCTGCTCGA AGCCAACCTG ATCAAGCAGC TCCGGCCGCG CTTCAACGTC CAGCTCCGTG ACGACAAGTC GTTTCCCTAC ATCCTGATCA CCGGCGACCA TTGGGCGCCG CAGATCCTCA AGCATCGCGG CGCGCAGAGC CGCCCCGGAC GGTATTTCGG TCCGTTTGCC TCGGCCGGTG CGGTGAACCG CACCATCACG GCGCTGCAGC GCGCGTTCCT GGTGCGGTCC TGCACCGACT CGTTCTTCGA GAGCCGAACC CGCCCCTGCC TGCTCTATCA AATCCGGCGG TGCGCCGGCC CGTGCACCGG TGAGGTCGAC TTCCCCGGTT ACAGTGAGCT GGTGCGCGAG GCGACCGACT TCCTGTCTGG CCGCAGCCGG GCGGTGAAGG AGCTGCTGGC GGCCGAGATG GAGAAAGCGT CGGGCGAGCT CGAATTCGAG ACCGCGGCGC TGTACCGCGA CCGTCTCGCC GCGCTGTCGG CGATCCAGTC CCAGCAGGGC ATCAATCCAC GCACCGTCGA AGAGGCCGAT GTGTTCGCCA TCCATCAGGA CGGCGGCTAC TCGTGCGTCG AAGTGTTCTT CTTCCGCACC GGCCAGAACT GGGGCAACCG CGCCTACTTC CCGCGCGCCG AGAAGTCGTT CACGCCGGCC GAAGTGCTCG GCGCCTTCGT GGCGCAGTTC TATGACGACA AGCCGCCGCC GAAGCTGATC CTGTTGTCGC ACGAGATCGA GGAGGCCGAG CTGCTCGCCG ACGCGCTGTG CGTCAAGGCC GGGCACAAGG TCGAGATCAC GGTGCCCAAG CGCGGCGAGA AGAAGGAACT GGTCGCCCAC GCCCAGACCA ACGCGCGCGA AGCGCTCGGC CGCAAGCTCG CCGACACCGC CACCCAGGCC CGGCTGCTGG AAAACCTCGC CACCACGCTC GGCCTGCCGA AGACGCCGCA GCGGATCGAG GTGTACGACA ACAGCCACAT CCAGGGCACC AACGCGGTCG GCGCGATGAT CGTCGCCGGC CCGGACGGCT TCATCAAGAA CCAGTACCGC AAATTCAACA TTCGCTCCGA AGGCCTCACG CCGGGCGACG ACTACGCGAT GATGCGCGAG GTGCTGCAGC GGCGGTTCAA GCGGCTGGTG ACGTCACAGG CCGAAGGCGA CGGCGAGGCC GCCGCGAAGG CCAAGCCGAA GGATGACGAT GTTCCGCAGT GGCCCGACCT CGTGATCATC GACGGCGGCC GCGGCCAGCT CAACGCCGCG CGCGAAGCAT TGTCCGGCAT CGGCTTGACC GACCAGGTCA CCCTGCTCGG CGTCGCCAAG GGCCCGGACC GCGACGCCGG GCGCGAAACA CTGTTCCTGC CGGACCGCGA CGCGATCAAG CTCGAGCCGC GCGACCCTGT GCTGTATTTC ATCCAGCGGC TGCGCGACGA GGCGCATCGT TTCGTGATCG GGTCGCATCG CACGCTGCGC AAGAAGGACA TCCGCGAGGC CGGCCTGCAG GAGATCCCCG GCATCGGCCC GACGCGCAAG CGCGCGCTGC TGCTGCATTT CGGCACGCTG AAGGAAATCG AGCGGGCCTC GATCGCCGAT CTCGGCAAAG TTCCAGGCAT CAGCGCCGAG AGTGCCAAGC GAATCTTCGA GTTTTTCCAT GCCCGTCCGG ACTGA
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Protein sequence | MIHDPAEPPA AAAEPPLDTA SPDGAAPVAD TRPAAGNQDI DAATASLAVE EDDEARLPEV EDEQEAEPAQ AGAGPMAVGR SAIARAVRLA PTSPGVYRML NAERDVLYVG KAKNVKKRLA SYARPTGQVL RIARMIALTV EVEVISTTTE TEALLLEANL IKQLRPRFNV QLRDDKSFPY ILITGDHWAP QILKHRGAQS RPGRYFGPFA SAGAVNRTIT ALQRAFLVRS CTDSFFESRT RPCLLYQIRR CAGPCTGEVD FPGYSELVRE ATDFLSGRSR AVKELLAAEM EKASGELEFE TAALYRDRLA ALSAIQSQQG INPRTVEEAD VFAIHQDGGY SCVEVFFFRT GQNWGNRAYF PRAEKSFTPA EVLGAFVAQF YDDKPPPKLI LLSHEIEEAE LLADALCVKA GHKVEITVPK RGEKKELVAH AQTNAREALG RKLADTATQA RLLENLATTL GLPKTPQRIE VYDNSHIQGT NAVGAMIVAG PDGFIKNQYR KFNIRSEGLT PGDDYAMMRE VLQRRFKRLV TSQAEGDGEA AAKAKPKDDD VPQWPDLVII DGGRGQLNAA REALSGIGLT DQVTLLGVAK GPDRDAGRET LFLPDRDAIK LEPRDPVLYF IQRLRDEAHR FVIGSHRTLR KKDIREAGLQ EIPGIGPTRK RALLLHFGTL KEIERASIAD LGKVPGISAE SAKRIFEFFH ARPD
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