| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1352 |
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| Symbol | xseA |
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| ID | 6409009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1423340 |
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| End bp | 1424953 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642711251 |
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| Product | exodeoxyribonuclease VII large subunit |
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| Protein accession | YP_001990367 |
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| Protein GI | 192289762 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.60305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCGAC TGCAAACGCC CCAAGCCCTC GCCAATGTCG GCGAATTCAC CGTCTCCGAG
CTGTCGCAGG CGCTGAAGCG GACGGTCGAG GACACCTATG GGCATGTCCG GGTGCGCGGC
GAGATTACCG GATTCCGCGG GCCGCATTCG TCCGGTCACT GCTATTTTGC GCTCAAGGAC
GAGGGCGCCA AGATCGAGGC GGTGATCTGG AAGGGCGTCG CCGGCCGGAT GCGGTTCAAG
CCGCAGGAAG GCCTGGAAGT CATCGCCACC GGCAAGCTGA CCACCTACCC CGGCTCGTCG
AAATATCAGA TCGTGATCGA GGCGCTCGAA CCGGCCGGCG TCGGCGCGCT GATGGCGCTG
ATGGAAGAGC GCAAGAAGAA GCTCGCCGCC GAGGGCCTGT TCGACGAGGC GCGCAAACAG
CTGCTGCCAT GGCTGCCGGA GGTGATCGGC GTCGTCACAT CCCCCACCGG GGCGGTGATC
CGCGACATCC TGCACCGGCT GGAAGACCGC TTCCCGCGCC GCGTGCTGGT GTGGCCGGTG
CGGGTGCAGG GCGAAGGCTC GGCCGAGCAG ATTGCCGCCG CGATCCACGG TTTCAACGCG
CTGCCCGAAG ACGGCCCGAT CCCGCGTCCC GACCTGCTGA TCGTCGCGCG CGGCGGCGGC
TCCCTCGAAG ATCTGTGGTC GTTCAACGAA GAGATCGTGG TCCGTGCCGC GGCTGACAGC
ATGATCCCGC TGATCTCGGC GGTCGGCCAT GAGACCGACG TTACCCTGAT CGATTTCGCA
TCCGACAAGC GGGCTCCGAC CCCGACGGCG GCGGCCGAAA TGGCGGTGCC GGTGCGGGCC
GAACTGTTCG TCGAAGTCGG CGGGCTGGCG CGGCGGATAC TGTCGAGCTG GCAGCGCGGC
CAGGATTTTC GCCGCAACGA GCTGCGCGCC GCCGCCCGCG CCCTGCCGGG CGCGTCCGAT
CTGCTCGCGA TTCCACGACA ACGGCTCGAC GGCGCGTCCG CCGCCCTGCC CCGCGCCCTG
CGCGCCAGTA CGAACGCCCA TCACCGCCGT TTCGCTGCGG CAGCGGCGGG CATGACGCTC
AAGGTGCTGC GGGCGCAGGT GGCGCACAGC GCCCACCGGC TCGACAGCGC GGGCACGCAA
TTGCAACGCT GCGCCCGCGC CACGCTGCGG CATCGCCGGG AGCGGTTCGA TGGGCTGGCG
GTGCGGCTGC AGGCCTCGAA ACTGGCCAAT CAGCAGGCGC AGCGGATGCG GATCGCCCGC
GAACAGGAGC GGCTGCAGCG CCTCGGCGAG CGGGCGCGGC GGGCGCTGAT CACCCTGCTG
GAACGCCGGC AGGCGCGAGT CGACGCCACC GGCAAGCTCC TCACCGCATT ATCATACCGA
GGCGTGCTGG CGCGCGGGTT CGCGCTGGTG CGGGACGCCG ATGGCCGCTC GGTGCACGCC
GCCGCGTCCG TCGCCGCAGG CGCCCGACTC AGTGTCGAAT TTGCCGACGG CCGGGTTGCT
GTTACCGCCG ACGGCGGCAG CGGATCGCCG GTCGAGGCTG CCAAACCGGC GCCAACACCG
GCAAAGCCGG CCAAGCGGCC GACAAGTCCC GCCGACCAGG GGTCACTATT CTAG
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| Protein sequence | MARLQTPQAL ANVGEFTVSE LSQALKRTVE DTYGHVRVRG EITGFRGPHS SGHCYFALKD
EGAKIEAVIW KGVAGRMRFK PQEGLEVIAT GKLTTYPGSS KYQIVIEALE PAGVGALMAL
MEERKKKLAA EGLFDEARKQ LLPWLPEVIG VVTSPTGAVI RDILHRLEDR FPRRVLVWPV
RVQGEGSAEQ IAAAIHGFNA LPEDGPIPRP DLLIVARGGG SLEDLWSFNE EIVVRAAADS
MIPLISAVGH ETDVTLIDFA SDKRAPTPTA AAEMAVPVRA ELFVEVGGLA RRILSSWQRG
QDFRRNELRA AARALPGASD LLAIPRQRLD GASAALPRAL RASTNAHHRR FAAAAAGMTL
KVLRAQVAHS AHRLDSAGTQ LQRCARATLR HRRERFDGLA VRLQASKLAN QQAQRMRIAR
EQERLQRLGE RARRALITLL ERRQARVDAT GKLLTALSYR GVLARGFALV RDADGRSVHA
AASVAAGARL SVEFADGRVA VTADGGSGSP VEAAKPAPTP AKPAKRPTSP ADQGSLF
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