Gene Rpal_1350 details

Gene Information

• Locus tag: Rpal_1350
• Symbol: lpxK
• ID: 6409007
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 1421934
• End bp: 1422956
• Gene Length: 1023 bp
• Protein Length: 340 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 642711249
• Product: tetraacyldisaccharide 4'-kinase
• Protein accession: YP_001990365
• Protein GI: 192289760
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1663] Tetraacyldisaccharide-1-P 4'-kinase
• TIGRFAM ID: [TIGR00682] tetraacyldisaccharide 4'-kinase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.271516
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTGAGC CGGGCTTCTG GCACCGGCCT CCTTCCCTGG TGTCGCGCCT GCTGCTGCCG 
ATCGCCGCAA TCTACGGCAA CATCGCCGCG GCGCGGATGC AGAAGGCCGG GACGACGGTC 
GGCGTGCCGG TGCTGTGCGT CGGCAACTAT CACATGGGCG GTGCCGGCAA GACGCCGACG 
ACGCTCGCGC TGGTGGCGTT GCTACGCGAA TTCGGCGAAA CCCCTGTCGT ACTGAGCCGC 
GGCTATGGCG GACGGCTGCA GGGACCGGTC CAGGTCGATC CCTCGCGGCA CAGCGCGGCC 
GACATCGGCG ACGAGCCACT GATGATGGCA CGCCGCCTAG CGGTGGTGGT CGCGCGCGAC 
CGCACCGATG GTGCGGCGCT GGCCTGTGCG CTTGGCGCCA CCGTGATCCT GATGGATGAC 
GGATTCCAGA ATCCCGCCTT GACCAAGGAC GCGTCGCTGA TCGTGGTCGA CAGTCACCGC 
AGCATCGGCA ATGGCAGCGT GTTTCCGGCC GGGCCGCTGC GTGCGCCGCT GCCGTTGCAG 
GTCGCGCGCA CCGATGCGCT GGTCGTGGTC GGCGATGGCG CCGCCGCGGA CGGCCTCGCG 
CAGCAAATTA CGACGAAGGG CGGCGTGGTG CTGCGAGCCC GACTGGTGCC GGAGCCGGCG 
TCTGTCGAGG CACTTCGCGG GCGGCGGGTG CTGGCGTTCG CCGGCATTGG CGATCCGGCG 
CGGTTCGTCG CGACACTTCG GGGCAGCGGC GTCGAAGTGG TCGAGCAACG CGCGTTCGCC 
GATCACCACC CGTTCACGGC GGAGGAACTG GCCGAGCTTG CCGCTGCGGC CAAGCGCGAT 
GGGCTGACCC TGGTCACGAC CGAAAAAGAT CTGGCGCGGA TCGGCCGCGC GCAGCAGGCG 
CTCGGCGTGG AGATCGTGCC GTTTGCCGTG ACGCTGGCGT TCGGCGACGA GGCCAAGCTG 
CGGCTGTTCC TGCTCGACCG GCTCAACGGC GCGCGCGCCG CGAAGCTCGC CGGGCGGCGC 
TGA 

 

Protein sequence

MREPGFWHRP PSLVSRLLLP IAAIYGNIAA ARMQKAGTTV GVPVLCVGNY HMGGAGKTPT 
TLALVALLRE FGETPVVLSR GYGGRLQGPV QVDPSRHSAA DIGDEPLMMA RRLAVVVARD 
RTDGAALACA LGATVILMDD GFQNPALTKD ASLIVVDSHR SIGNGSVFPA GPLRAPLPLQ 
VARTDALVVV GDGAAADGLA QQITTKGGVV LRARLVPEPA SVEALRGRRV LAFAGIGDPA 
RFVATLRGSG VEVVEQRAFA DHHPFTAEEL AELAAAAKRD GLTLVTTEKD LARIGRAQQA 
LGVEIVPFAV TLAFGDEAKL RLFLLDRLNG ARAAKLAGRR