Gene Rpal_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1336 
Symbol 
ID6408993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1408471 
End bp1409259 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content64% 
IMG OID642711235 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001990351 
Protein GI192289746 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAACA AAACTACCCT CGCATTGCTG ACCAGCGTGT CCTGTCTCAC CGCTGGCTAT 
CATCCCGCCG TCGCTTACGA ATTTTCATCG GGCTCGCAGC CGACGGTGGT CTATGCCGAG
CCGCAGCCCG CCCCTCCGGC GCGGGTACGG ACCGCCTATG TCGACCGCCC GAATATGGGC
GGCGGTTTCA TCGAATTCCT GTTCAGCGAT GGCGCTCCGC CGCCGTCCTC GCGGTATTAT
CAGCGTGAGC CGGCCTATGA ACAACGTCGT GAGTACATCG CGCCGACCGC TCCGCAGCTG
ATGCAGGAGC AGGAAGCGGC GATCGAGCCG GCCCATCCCG AGTTCGATCC GCGCTACGAA
AAGCAACTTG TTGATTACCA TGGCGGCGAA AAGGCCGGCA CGATCGTGAT CGATACCCCG
AACAAGTTCC TCTACCTCGT GCAGGGCGAC GGCAAGGCGC TGCGCTACGG CGTCGGCGTC
GGCCGTCCCG GCTTCACCTG GTCGGGCGTG AAGACGATCA CCGCCAAGCG CGAATGGCCG
GCGTGGACGC CGCCGAAGGA AATGCTGGCG CGCCGTCCCG ATCTGCCGCG TCACATGGAA
GGCGGACCGG CCAATCCGCT CGGCGCGCGG GCGATGTATC TCGGCTCCTC GCTGTACCGC
ATCCATGGCT CCAACGAGCC TTGGACGATC GGGACCAACG TCTCGTCCGG CTGCATCCGC
ATGCGCAACG AAGACGTCAT CGACCTGTAC AGCCGCGTTG GCGTCGGCAC CAAGGTGGTG
GTGATCTGA
 
Protein sequence
MFNKTTLALL TSVSCLTAGY HPAVAYEFSS GSQPTVVYAE PQPAPPARVR TAYVDRPNMG 
GGFIEFLFSD GAPPPSSRYY QREPAYEQRR EYIAPTAPQL MQEQEAAIEP AHPEFDPRYE
KQLVDYHGGE KAGTIVIDTP NKFLYLVQGD GKALRYGVGV GRPGFTWSGV KTITAKREWP
AWTPPKEMLA RRPDLPRHME GGPANPLGAR AMYLGSSLYR IHGSNEPWTI GTNVSSGCIR
MRNEDVIDLY SRVGVGTKVV VI