| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1326 |
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| Symbol | |
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| ID | 6408983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1396034 |
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| End bp | 1397794 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711225 |
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| Product | ABC transporter domain protein |
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| Protein accession | YP_001990341 |
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| Protein GI | 192289736 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAACA TCAAAGGAAC GCTGGCGACC GCCTGGCGGA TCGCCGCGCC GTATTTCAGT
GCCGAAGACA AATGGATGGG CCGCGGGCTG CTCGCAGCCG TCGTGGTCAT CGAGCTCGCC
GTAGTCGGGC TCTCGGTGCT GTTCAACCGC TGGAACAACG TGTTCTACAA CGCGCTGCAG
GAGCGGAACT ACGACGTCTT CACCTATCAG ATCATCTACT TCTGTGTGCT GGCGGCGATC
TGGATCGCTC TCAAAGTCTA TCAGCTCTAT CTCAATCAGT GGCTGCAGAT CCGCTGGCGC
AAGTGGATGA CCGAGCGCTA TCTCGGCGGC TGGCTGCACG ACGCCAACCA CTACCAGATG
CAGCTCACCG GCGACGCCGC CGACAACCCC GATCAGCGCA TCGCCGAGGA CACGCAGTTG
TTCGTCGAGC GCACGCTGGC GCTGGGCATC GGCCTGCTCA ATGCCGTGGT GACGCTGGCC
TCGTTCGTGG TGATCCTGTG GGGGCTGTCG AACGAAGCGC CGCTGCATCT GTTCGGCCAG
GACGTCCCGA TCCCCGGCTA TCTCGTCTGG GGCGCGCTGA TCTATGCCGC GCTGGGCACC
GCCCTCACCC ATTGGATCGG CTCGCCGCTG GTCGATCTCA ACTTCCGCCA GCAGCGCTAT
GAAGCCGACT TCCGCTTCAA CCTGGTGCGC GCCCGCGAGA ACGCCGAACA GATCGCGCTG
CTCCGCGGCG AGCCGGCCGA GCGCGACAAG CTGTCGTCCC GCTTCAGCTA CGTGGCCGAG
AACTTCATGC GGATCATGAG CCGGACCAAA CGGCTGACCG CCTTCACCGC CAGCTACTCG
CAGGCTTCGA TCATCTTCCC CTACATCCTG GTGGCGCCGG CCTTCTTCGC CCAGAAGGTG
CAGCTCGGCG GCATGATGCA GACCGCGTCC GCCTTCGGCA GCGTCCAGGA CTCGCTGTCG
TTCTTCATCA CCGCCTACCG AACGCTGGCG GAATGGCAGT CGGTGCTGCA GCGGCTCGAC
GGCTTCGAGC GCGCGATTGA AGGCGCCTCC ACCCGGCGCG ATAGTCCAGG CGTAATGCGC
GTGCCGGCTG CGGCCGGCGG AATCGAACTG AAGGACCTCA ACCTGACGCT GCCGGCCGGA
GCGCCGCTGA TCAGCGCCGA CGGCTTCAAG ATCGGCGACA ACGAGCGGAC CCTGATCGTC
GGCCCATCGG GCGCCGGCAA GTCGACGTTG TTCCGCGCGA TCGCGGGGAT CTGGCCGTTC
GGCTCGGGCT CGATCGCAAT CCCTGCGGAT GCGACGCTGA TGATGCTGCC GCAGCGCCCA
TATTTCCCGG TCGGCGAGCT GCGCGCCGCG ATCGTCTATC CGGCCGAATC CGGCGCGTTC
AGCGACGTGC AGGTCGCCGA GGTGCTACGC GAGGTGGGAC TGCCGGCACT GGCGGAACGG
CTCGATCAGC ATGGCCATTG GAACAGGACG CTGTCGCTCG GCGAGCAGCA GCGGCTCGGC
ATCGCGCGGG CGCTGCTGCA CGCCCCGCAA TACCTGTTCC TCGACGAAGC CACCGCGTCG
CTGGACGAGC CGTCCGAAGC GGCGCTGTAC AAGCTGCTGG ACCGCAAGCT GCCGGGCACC
ACGATCGTCT CGATCGGCCA CCGCTCGACG CTCGAGGCCT TCCATCAGCG CGACGCTGTG
CTGTCGCGCA CCGGCGACGG CTTCGCCCTG CACGACCGAG CCAAGGCGGC GGCTCCCGAA
GTCGGGCTTG CGGGCAGCTG A
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| Protein sequence | MSNIKGTLAT AWRIAAPYFS AEDKWMGRGL LAAVVVIELA VVGLSVLFNR WNNVFYNALQ
ERNYDVFTYQ IIYFCVLAAI WIALKVYQLY LNQWLQIRWR KWMTERYLGG WLHDANHYQM
QLTGDAADNP DQRIAEDTQL FVERTLALGI GLLNAVVTLA SFVVILWGLS NEAPLHLFGQ
DVPIPGYLVW GALIYAALGT ALTHWIGSPL VDLNFRQQRY EADFRFNLVR ARENAEQIAL
LRGEPAERDK LSSRFSYVAE NFMRIMSRTK RLTAFTASYS QASIIFPYIL VAPAFFAQKV
QLGGMMQTAS AFGSVQDSLS FFITAYRTLA EWQSVLQRLD GFERAIEGAS TRRDSPGVMR
VPAAAGGIEL KDLNLTLPAG APLISADGFK IGDNERTLIV GPSGAGKSTL FRAIAGIWPF
GSGSIAIPAD ATLMMLPQRP YFPVGELRAA IVYPAESGAF SDVQVAEVLR EVGLPALAER
LDQHGHWNRT LSLGEQQRLG IARALLHAPQ YLFLDEATAS LDEPSEAALY KLLDRKLPGT
TIVSIGHRST LEAFHQRDAV LSRTGDGFAL HDRAKAAAPE VGLAGS
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