Gene Rpal_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1316 
Symbol 
ID6408973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1383794 
End bp1384834 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content70% 
IMG OID642711215 
ProducttRNA(Ile)-lysidine synthetase 
Protein accessionYP_001990331 
Protein GI192289726 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID[TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGGAA CCGATCACGA GGCAGTATCT GCAACCGAGG CGCGGCGGCT GTTCGCCGAC 
TGGAAGGCGG CGCCGGCGAT CGTGCTGGCG GTCTCCGGCG GGCCCGACTC GCTGGCGCTG 
ATGTGGCTCG CCGCCCGCTG GCGGAAGTCG TTGAAGCAAG GACCGGCATT GGCGGTCGTC 
ACCGTCGATC ACGGCCTCCG TCCTGAGGCA GCCGCCGAGG CGCGCGCGGT GAAGCGATTG 
GCGGCCTCGC TCGACCTTCC GCACCGGACG CTGCGGTGGA GTGGCGACAA GCCCAGCACG 
GGGATCCAGG CGGCGGCTCG CGGGGCACGT TATCGGTTGC TGGCGAACGC CGCCAAAACG 
CTCGGTGCCT CGCATGTGAT GACCGCGCAT ACCCGCGACG ATCAGGCGGA GACCGTCCTG 
ATGCGCCTGT CGCGCGGCAG TGGAATCGCC GGCCTTGCCG CGATGGCGCG GGAAATCGAG 
CGGGACGGGG TGGTGCTGGC GCGGCCGCTG CTCGATGTTC CCAAGGCCCG GCTGATCGCC 
ACGCTGGCCA AAGCTCGAAT CGCGTTCGCG ACCGACCCGA GCAACGCCGA TCCGCGCTTC 
ACCCGCCCAC GGCTGCGCGA GCTGATGCCG CAGCTTGCGG CCGAAGGCTG CGATGCCCGT 
TCGCTGGTTC GGTTGGCGGT CCGTGCGGCC CGCGCCGATG CAGCGCTGGA ACTGATGACC 
GATGGCGCTG AGCAGTTCTT GGCCTCGCTC GATGCCGGCT TGGAGCGCCC GGGCGTCGAT 
GCACGCGCGT TCCTAGGGCT GGCTGCAGAA ATTCAGATTC GTTTGTTGCT GCGAACCCTG 
TCCCGTCATG GCCACGAGGG GCCGCCGGAA CTCGGCAAGG TCGAAGTGCT CGCGGAAGCG 
CTGAAGCAGG CGGCGGCGAG GAGCCCGCAA GCGGCAGCGA AGATTCGCCT CAAGCAGACC 
CTTGCGGGTG CCGTGATTTC TCTCACCGGT GACCGCCTGG TGATTGCCCC AGCCCCGCCG 
CGGCGTGGTC GGGCCCGCTG A
 
Protein sequence
MSGTDHEAVS ATEARRLFAD WKAAPAIVLA VSGGPDSLAL MWLAARWRKS LKQGPALAVV 
TVDHGLRPEA AAEARAVKRL AASLDLPHRT LRWSGDKPST GIQAAARGAR YRLLANAAKT 
LGASHVMTAH TRDDQAETVL MRLSRGSGIA GLAAMAREIE RDGVVLARPL LDVPKARLIA 
TLAKARIAFA TDPSNADPRF TRPRLRELMP QLAAEGCDAR SLVRLAVRAA RADAALELMT 
DGAEQFLASL DAGLERPGVD ARAFLGLAAE IQIRLLLRTL SRHGHEGPPE LGKVEVLAEA 
LKQAAARSPQ AAAKIRLKQT LAGAVISLTG DRLVIAPAPP RRGRAR