| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1311 |
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| Symbol | tolB |
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| ID | 6408968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1376943 |
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| End bp | 1378277 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711210 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001990326 |
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| Protein GI | 192289721 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTTTG ACCTCAATCG CCGCCAATTG ATGATCTCCG CCGCGACGGC CGCTGGCGCG
CTCGCGCTCG GCCCCGCCCG CGATGCCTTC GGTCAAGCCC GGGTGCAGAT CACCGAAGGC
AACGTCGCCC CGCTGCCGAT CGCGATTCCG AACTTCGTCG CCGGCACGCC GTCGGACGCT
GAAGTGGGCA CCGGCGTATC GCAGGTGATC ACCAACAATC TGAAGCGCTC GGGACTGTTC
GCGCCGATCG ATCAGGCCGC GTATCTGGAA AAGATCACCA ACATCGACGT GCCGCCGCAG
TTCAAGAGCT GGGCGAGCAT CAACGCGCAG GCGCTGGTGA CCGGGCGGAT GACCCGGCAG
GGCGATGGCC GCCTCAAGGC CGAATTCCGA CTCTGGGACG TTGCCACCGG TCAGCAGCTT
GCCGGCCAGC AGTATTTCAC CTCGCCGGAA TATTGGCGGC GCATCGCCCA CATCATCTCG
GACCAGATCT ACGAGCGTCT GACGGGCGAG AAGGGCTACT TCGACAGCCG CGTGGTGTTC
ATCGACGAGA GCGGCCCGGC TGACCGGCGC GTCAAGCGGC TGGCGCTGAT GGATCAGGAC
GGCGCCAACG TGCGCTATCT CACGCGCGGC AGCGACCTCG TGCTGACGCC GCGGTTCTCG
CCGACCAACC AGGAAATCAC CTACATGGAG TTCGGCCAGG GTGAGCCGCG GGTGTATCTG
TTCAACGTCG AGACCGGCCA GCGCGAGATC GTCGGCAATT TCCCCGGCAT GTCGTTCGCG
CCGCGGTTCT CGCCGGATGG CCAGCGCATC ATCATGAGCC TGCAACAGGG CGGCAACTCC
AACCTGTTCG TGATGGATTT GCGCTCCAAG GCGACGACGC GGCTGACCGA CACGCCGGCG
ATCGACACTT CGCCCTCCTA CGCCCCCGAC GGCAGCCGGA TCTGCTTCGA AAGCGATCGC
GGCGGCAAGC CGCAGATCTA CATCATGCCG GCTAGTGGCG GTCAGGCACA GCGGATTTCA
TTCGGCGACG GCAGCTATTC GACCCCGGTG TGGTCGCCGC GCGGCGACTA CATCGCCTTT
ACCAAGCAGG GCGGCGGCCA GTTCGCGATC GGCATCATGA AGCCGGACGG TTCTGGCGAA
CGCATCCTGA CCTCCGGGTT CCACAATGAG GGCCCGACCT TCGCGCCCAA CGGCCGGGTG
TTGATGTTCT TCCGCGATCC GGGCGGAAAC GCCGGCCCGT CGCTGTTCAC CGTCGACGTT
TCGGGCCGCA ACGAACTGCG TGTTCCGACC CCCGGTTACG CGTCCGACCC GGCCTGGTCG
CCGCTGCTGT CCTGA
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| Protein sequence | MSFDLNRRQL MISAATAAGA LALGPARDAF GQARVQITEG NVAPLPIAIP NFVAGTPSDA
EVGTGVSQVI TNNLKRSGLF APIDQAAYLE KITNIDVPPQ FKSWASINAQ ALVTGRMTRQ
GDGRLKAEFR LWDVATGQQL AGQQYFTSPE YWRRIAHIIS DQIYERLTGE KGYFDSRVVF
IDESGPADRR VKRLALMDQD GANVRYLTRG SDLVLTPRFS PTNQEITYME FGQGEPRVYL
FNVETGQREI VGNFPGMSFA PRFSPDGQRI IMSLQQGGNS NLFVMDLRSK ATTRLTDTPA
IDTSPSYAPD GSRICFESDR GGKPQIYIMP ASGGQAQRIS FGDGSYSTPV WSPRGDYIAF
TKQGGGQFAI GIMKPDGSGE RILTSGFHNE GPTFAPNGRV LMFFRDPGGN AGPSLFTVDV
SGRNELRVPT PGYASDPAWS PLLS
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