| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1308 |
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| Symbol | |
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| ID | 6408965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1374623 |
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| End bp | 1375333 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711207 |
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| Product | protein TolQ |
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| Protein accession | YP_001990323 |
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| Protein GI | 192289718 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCGG CCGACGTGAC ACAGCTTGCT CCGGCGGTCT CCACGGACGT GTCGCTGCTG
TCGTTGTTCT GGCACGCCCA CTGGGTCGTG AAGTCGATTA TGCTCGGGCT GCTCGGCTGC
TCGGTCTGGG TCTGGGCGAT CGCGATCGAC AAACTGCTGC TGTTCTCGCG CACCAAGCGC
GCGATGGATC GCTTCGAACA GGCGTTCTGG TCCGGCGAGT CGATCGACGA GCTGTACCGC
GCACTGTCGG CGAAGCCGAC GCATTCGATG GCCGCGTGTT TCGTCGCCGC GATGCGCGAG
TGGAAGCGCT CGTTCGAAAG TCATTCACGC TCGTTCGCCG GCCTGCAGAT GCGGATCGAG
AAGGTGATGA ACGTCTCGAT CGCGCGTGAG GTCGAACGGC TGGAGCGCCG CCTGCTGGTG
CTGGCGACCG TCGGCTCGGC CGGCCCGTTC GTCGGTCTGT TCGGCACCGT CTGGGGCATC
ATGTCGAGCT TCCAGTCGAT TGCCGCGTCG AAGAACACGT CGCTGGCGGT GGTCGCGCCC
GGTATCGCCG AGGCGCTGTT CGCCACCGCG ATCGGCCTGA TCGCCGCAAT TCCGGCGACA
ATTTTCTACA ATAAGTTCAC GTCGGAAGTG AACCGGCAGA CGCAGCGGCT GGAAGGCTTC
GCCGACGAGT TCTCGGCGAT CCTGTCGCGG CAGATCGACG AGCGCACGTG A
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| Protein sequence | MNPADVTQLA PAVSTDVSLL SLFWHAHWVV KSIMLGLLGC SVWVWAIAID KLLLFSRTKR
AMDRFEQAFW SGESIDELYR ALSAKPTHSM AACFVAAMRE WKRSFESHSR SFAGLQMRIE
KVMNVSIARE VERLERRLLV LATVGSAGPF VGLFGTVWGI MSSFQSIAAS KNTSLAVVAP
GIAEALFATA IGLIAAIPAT IFYNKFTSEV NRQTQRLEGF ADEFSAILSR QIDERT
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