| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1307 |
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| Symbol | |
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| ID | 6408964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1373410 |
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| End bp | 1374315 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642711206 |
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| Product | RNA polymerase sigma factor SigJ |
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| Protein accession | YP_001990322 |
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| Protein GI | 192289717 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAAGGC CTCCTGATCC AGCTACGTCC GACGATGCCG CAGCGAGCTT CGCGCCGCTG
CGGCCGCGGC TATTGCGCGT CGCCTATCGG ATGCTGGGCT CGATCAGCGA GGCCGAAGAC
GTCGTGCAGG ACGCTTACTT GCGCTGGCAC CGCAGCGATC GCCGCGACGT TCGCGATCCG
GCGGGCTTTC TCACGCGCAC CGTCACGCGC CTGTGCCTCG ACGTGCTGAA GTCGGCTCGG
CAGCGGCGCG AGACCTATGT GGGGCCGTGG CTGCCGGAGC CGATCATTGC CCCGGAGCTT
GAGCCTGATG GCGATGACAT CACCCTCACT TTGATGCTGG CGCTCGAGCG GCTGTCGCCA
CTGGAGCGGG CCGCATTCTT GCTCCACGAC GTGTTCGGTG TCGGCTTCGA TGAGATCGGA
ACGACGCTCG GACGTGATGC CGCTGCCTGC CGCCAGCTTG CGGCGCGAGC CCGGGCACAT
GTCCGTGCTG AGCGGCCGCG CTTTCCGGTC TCGGCAGAGC AGGGGCAGGC GATCGCCGCG
GCGTTCTTCC AGGCTTCGCG GAGCGGCGAT CTTGGCGCGC TGACGTCGCT GCTCGCGAAC
GAGGTCGTCT TTGTCAGCGA TGGCGGTGGC AAACGGCCGG CAGCGATCAA CCCGGTGCAT
GGCAGCGATC GGGTGACACG CCTGCTTGTC GGCATCGCGC GTAAGGCGCC GCCGGGGGCG
AGTTCGCTGC TTGCGGTTCA GCTGATTGAC GGCCTGCCGG GCTTCGTCTC GCGCGAGCCG
GACGGGCTGA TCCAGACCAC GGCGCTCGAA ATGACGGATG GTCGGATCGT CGCGATCTAT
GTGGTCCGGA ACCCTGACAA GCTCCGGCAT CTGATCCCCG TGCAGCCCTC CGCCGGTCTG
CACTGA
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| Protein sequence | MPRPPDPATS DDAAASFAPL RPRLLRVAYR MLGSISEAED VVQDAYLRWH RSDRRDVRDP
AGFLTRTVTR LCLDVLKSAR QRRETYVGPW LPEPIIAPEL EPDGDDITLT LMLALERLSP
LERAAFLLHD VFGVGFDEIG TTLGRDAAAC RQLAARARAH VRAERPRFPV SAEQGQAIAA
AFFQASRSGD LGALTSLLAN EVVFVSDGGG KRPAAINPVH GSDRVTRLLV GIARKAPPGA
SSLLAVQLID GLPGFVSREP DGLIQTTALE MTDGRIVAIY VVRNPDKLRH LIPVQPSAGL
H
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