| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1306 |
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| Symbol | |
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| ID | 6408963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1372959 |
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| End bp | 1373426 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711205 |
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| Product | alkylhydroperoxidase like protein, AhpD family |
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| Protein accession | YP_001990321 |
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| Protein GI | 192289716 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACACCGC GCCTCAACCC CGCCGCTGCC GCGCCAGACG CCTACAAGGC GATGGTCGCA
CTGGAAAAAT ACATCCAGGG CAGCGGCCTC GAGCCGAGCT TGATCGAACT GGTCAAGATG
CGCGCCTCGC AGATCAACGG CTGCGCATTC TGTCTCGACA TGCACAGCAA GGACGCCCGC
GCTCGTGGCG AGAGCGAGCA GCGGCTGTAT CTACTCAATG CCTGGCGGGA ATCGCCGCTC
TACACTGATC GTGAGCGCGC CGCGCTCGGC TGGACCGAAG CGCTGACACT GGTCGCGCAA
ACCCAGGCGC CGGACCAGGA CTACGCGGCC GTGAAGTCGC ATTTCAGCGA CGCCGAACAG
GTCAATCTGA CGTTGCTGAT CGGGGCGATC AACACCTGGA ACAGGATCGC GATCGGCTTC
CGAATGCTGC ATCCGATCCC AGCCGTCGCG CATGCCAAGG CCTCCTGA
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| Protein sequence | MTPRLNPAAA APDAYKAMVA LEKYIQGSGL EPSLIELVKM RASQINGCAF CLDMHSKDAR
ARGESEQRLY LLNAWRESPL YTDRERAALG WTEALTLVAQ TQAPDQDYAA VKSHFSDAEQ
VNLTLLIGAI NTWNRIAIGF RMLHPIPAVA HAKAS
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