| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1295 |
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| Symbol | |
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| ID | 6408952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1365083 |
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| End bp | 1366333 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642711194 |
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| Product | OpgC protein-like protein |
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| Protein accession | YP_001990310 |
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| Protein GI | 192289705 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4645] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.333454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGGAG GAGTTCAGTC TCGCGAGGTG CCGCTGATGG GGCAGGGCGA GCGCGATTTG
CGGCTCGATT TCCTGCGCGG CGTCGGCCAG TGGATGATCT TTGTTGATCA CATCCCGTAC
AATTTCCTCA ACTGGTTCAC GCTGCGCAAC TACGGCTTCT GTGACGCCGC TGAATTCTTC
GTTTACATCT CCGGCTACTC GATCGGGTTC GCTTACGGGC CGGCGGTGCG TGCCGGCGAG
ATGGTCGCGG CCACCAAGCG ACTGTGGACC CGCGCGGCGC AGCTCTATGT CGCGCACATC
TTCCTGTTCC TGTTCTTCAC CGCGCAGATC TCCCGCGCCG CGCGTCGGTT CGACAATCCG
ATGTACAAGG ACGAGTTCAA CGTCGCGCAG TTTCTCGAAA ACCCCGACGT GATGATCCAG
CAGGCATTGC TGCTGAAGTA CAAGCCGGTC AATCTCGACG TGCTGCCGCT GTACATCGTG
CTGGTGGTTG CCGCGCCGCT GATCCTGTGG GGCCTGCTGC GAAAGCCGAC TCTGACGCTG
GTGTGCTCCG GCCTGCTGTA CCTCGTCTCT CGCCACTTCG GCTGGAATCT GCCGTCGTTC
CCGGACGGCC ATTGGTATTT CAACCCGTTC GCCTGGCAGT TTCTGTTTGT GTTCGGCATC
TGGTGCGGCT TCGGCAACGG CCCGCAAATT CGCCCCTGGG TGAAGTCGCT GCCCAATCAG
ATCCTGAGCT GGACCATCGT GGTGGTTGCG CTGGTGATCG CGCTGTCGTG GAATTTCGAA
GCGCTGTACG GCCTGGTGCC GGAGTCGATC GGAAAGATCC TGTATCCGAT CGACAAGACA
AGCCTGGCGC CGGTGCGTCT GATCCACTTC CTCGCGTTGC TCGCGATCGT CGTGAAGCTA
CTGCCGCCGG ATCTGCCGGC GCTACGCTCC GAGCATCTGC GCCCGATCAT CCTGTGCGGC
CAGCGCTCGC TGCCGGTGTT CTGCTTCGGT GTGATCCTCG CCTTCACGGC GCATTGGATC
CTGGTTCAGG TGTCGGGCAG CATCGCGATG CAGATCCTGG TCAGCGTCGG GGGCATTGGC
CTGATGACCG GCGTGGCTTG GCTCGCGACC TGGTACCGGA CGCTGCCGAC GCTAGTGACG
GTGCCTGCGA CGGTGCCGGT CGATCACGAC GACGAGGTGC CGGCGGAAGC CGAGAAGGCG
TCGATCGCTG AGCCCTCCGC TCCAGAGCGG GTGCCGACCG AGCGCGCTTG A
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| Protein sequence | MTGGVQSREV PLMGQGERDL RLDFLRGVGQ WMIFVDHIPY NFLNWFTLRN YGFCDAAEFF
VYISGYSIGF AYGPAVRAGE MVAATKRLWT RAAQLYVAHI FLFLFFTAQI SRAARRFDNP
MYKDEFNVAQ FLENPDVMIQ QALLLKYKPV NLDVLPLYIV LVVAAPLILW GLLRKPTLTL
VCSGLLYLVS RHFGWNLPSF PDGHWYFNPF AWQFLFVFGI WCGFGNGPQI RPWVKSLPNQ
ILSWTIVVVA LVIALSWNFE ALYGLVPESI GKILYPIDKT SLAPVRLIHF LALLAIVVKL
LPPDLPALRS EHLRPIILCG QRSLPVFCFG VILAFTAHWI LVQVSGSIAM QILVSVGGIG
LMTGVAWLAT WYRTLPTLVT VPATVPVDHD DEVPAEAEKA SIAEPSAPER VPTERA
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