| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1294 |
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| Symbol | |
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| ID | 6408951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1363663 |
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| End bp | 1364973 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711193 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_001990309 |
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| Protein GI | 192289704 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.746503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATA AGCCCCATAG GATTGTTATC GTCGGCGGCG GCGCCGGTGG CCTGGAACTC
GCCACGGCGC TCGGCAACAA GTACGGCAAG TCGGACGCCG TCCGCGTCAC CCTGGTCGAC
CGCAGCCGCA CTCACATCTG GAAGCCGCTA CTGCATGCGA TCGCCGCCGG CTCGCTGCGC
CGCTCCCAGC ACGAGCTGAA CTATCTGGCC CAGGCGCACT GGCATGGCTT TCACTACCGC
CTCGGCGAGA TGAATGGTCT CGACCGCGCC CGCAAGGTGA TCAAGCTGGC CCCGGTGATC
GACGACGAGG GCCGCGAGAT CAATCCGGAG AGCGAGCTCG CTTACGACAC GCTGGTGATC
GCGATCGGCA GCGTTACCAA TGATTTCGGC ACCCCGGGGG CGCGCGATCA CGCGGTGCCG
TTGGAGACGC CGGAGCAGGC GTCGCGCTTC AACAAACGCA TGGTCAATGC CTGTCTGCGC
GCTCAGCATC AGCACGCCCC GATCGAGCCG GGGCAGCTGC ATGTTGCGAT CATTGGCGCC
GGCGCCACCG GCACCGAACT CGCCGCCGAG CTGCATCACA CCGCGCGCGA GATCATCGCC
TACGGTCTCG ACAAGATCGA TCCTGAGCAC GACCTCAAGA TCGTGCTGAT CGAAGCCGCG
CCGCGCATTC TGCCGGCGCT GCCGCCGCGT ATTTCGGATG CGACGCTGAA GCTGCTGCTC
GATCTCGGCG TCGAGGTGCG CACCGGCGCC CGCGTGGCGG AAGTGCTCGA CCATGCGGTC
CGTCTGGCCG ACGGCGAAGT GATCCCGTCG GAGCTGGTGG TGTGGGCGGC CGGCGTGCGC
GCTCCGGATT TTCTCGAAGG GATCGACGGC CTGGACACCA ACCGCATCAA CCAGCTGGTG
GTGCGGCCGA CGCTGCAGAC CACCCGCGAC GATAATGTGT TCGGGATGGG CGACTGCGCT
GCCTGCGCAA TTCCCGGCTA CGAGAACGGT GTGCCGCCGC GGGCGCAGGC CGCTCACCAG
GAAGCCGAAT TCATGCTGGA GCAGATCGAG AAGCGGCTGA AGGGCGAGCC GCTCGGCGAA
TTCCGCTATC GTGATCTCGG CTCGCTGGTG TCGCTCGGCA AGTATTCCGC GGTCGGCAAT
CTGATGGGAT CGCTGGTCGG TAAGAGCTTT CTGATCGAAG GCTATTTCGC TCGCTTCATG
TATCGCTCGC TCTACAAGAT GCACGAAGCG GCGCTGTACG GCCGCGGCCG CACCCTGCTC
AGCGTGCTGT CTGGCTCCAC ACGACCCACC CCCACGGTGA AGTTGCACTA G
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| Protein sequence | MSDKPHRIVI VGGGAGGLEL ATALGNKYGK SDAVRVTLVD RSRTHIWKPL LHAIAAGSLR
RSQHELNYLA QAHWHGFHYR LGEMNGLDRA RKVIKLAPVI DDEGREINPE SELAYDTLVI
AIGSVTNDFG TPGARDHAVP LETPEQASRF NKRMVNACLR AQHQHAPIEP GQLHVAIIGA
GATGTELAAE LHHTAREIIA YGLDKIDPEH DLKIVLIEAA PRILPALPPR ISDATLKLLL
DLGVEVRTGA RVAEVLDHAV RLADGEVIPS ELVVWAAGVR APDFLEGIDG LDTNRINQLV
VRPTLQTTRD DNVFGMGDCA ACAIPGYENG VPPRAQAAHQ EAEFMLEQIE KRLKGEPLGE
FRYRDLGSLV SLGKYSAVGN LMGSLVGKSF LIEGYFARFM YRSLYKMHEA ALYGRGRTLL
SVLSGSTRPT PTVKLH
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