Gene Rpal_1293 details

Gene Information

• Locus tag: Rpal_1293
• ID: 6408950
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 1363099
• End bp: 1363563
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642711192
• Product: tol-pal system-associated acyl-CoA thioesterase
• Protein accession: YP_001990308
• Protein GI: 192289703
• COG category: [R] General function prediction only
• COG ID: [COG0824] Predicted thioesterase
• TIGRFAM ID: [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family; [TIGR02799] tol-pal system-associated acyl-CoA thioesterase

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGACG CTCGCTTGCA TCATCTTTCC CTCGACGGCG CCATTATCGA TGGCGCTCAC 
CACATGCATG TCCGGGTCTA TTACGAGGAC ACCGACTTCT CCGGCATCGT CTATCACGCC 
AACTACCTAC GCTTCATGGA ACGGGGGCGG ACCAATTATC TGCGGCTGCT TGGGGCGGCG 
CAGAGCGAGT TGTTCGCGGA AGCCGAAAGC GAAACCCCGG GCTTTGCCTT CGTGGTGCGG 
TCGATGCAGC TCGACTTCCT CAAGTCGGCC AAGATGGACG ACCTGCTCGA GGTGATCACC 
CGGCCGGTCG AAGTCCGCGG CGCTTCGATC ACCATGCAGC AGCAGATCAA GCGTGGCGAT 
CTCGTGCTGA TGGAGGCCAA GGTCAAGGTC GCGTTCGTCT CCGGTGGCCG CGCTAGGCCT 
ATTCCGATAC CGCTTCGGGT GGCCATGAAG GCGGACGTGG TCTGA 

 

Protein sequence

MADARLHHLS LDGAIIDGAH HMHVRVYYED TDFSGIVYHA NYLRFMERGR TNYLRLLGAA 
QSELFAEAES ETPGFAFVVR SMQLDFLKSA KMDDLLEVIT RPVEVRGASI TMQQQIKRGD 
LVLMEAKVKV AFVSGGRARP IPIPLRVAMK ADVV