Gene Rpal_1290 details

Gene Information

• Locus tag: Rpal_1290
• Symbol: ruvA
• ID: 6408947
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 1360824
• End bp: 1361441
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 642711189
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_001990305
• Protein GI: 192289700
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGGCA AGCTCAAGGG CATCATCGAC AGCTACGGCG AGGACTACGT GATCCTCGAC 
GTGCAGGGCG TCGGCTATCA GGTACACTGC GCCAGCCGCA CCCTGCAGGC GCTGCCGTCG 
CCGGGTGAGG CGGCGACGCT GTCGATCGAA ACCTATGTGC GCGAGGATCA GATCAAGCTG 
TTCGGTTTCC GCACCGACAC TGAGCGGGAG TGGTTCCGGC TGCTGCAGAC GGTGCAGAGC 
GTCGGCGCCA AGGTGGCGCT GGCAGTGCTG TCGACATTGC CGCCGCACGA CCTCGCTAAC 
GCGATTGCGC TACGCGACAA GGCCGCGGTG GCGCGCACGC CCGGCGTCGG GCCGAAGGTC 
GCCGAGCGCA TCGTCACCGA GTTGAAGGAC AAGGTTCCGG CGCTCAGTGC GGTCGACCCC 
GCAGTGGTGA AGCTCTCCGG CGCGATCGAC GACAATCGGG CGCCGCGCGC AGTGACGGAT 
GCGATTTCGG CGCTGGTTAA TCTCGGCTAT GGCCAGCCGC AGGCGGCGGC CGCGGTCGCC 
ACAGCCTCCC GCACTGCCGG TGAGGACGCC GAGACGGCGC AGCTGATCAA GCTCGGCCTG 
AAGGAGCTGT CGAAGTGA 

 

Protein sequence

MIGKLKGIID SYGEDYVILD VQGVGYQVHC ASRTLQALPS PGEAATLSIE TYVREDQIKL 
FGFRTDTERE WFRLLQTVQS VGAKVALAVL STLPPHDLAN AIALRDKAAV ARTPGVGPKV 
AERIVTELKD KVPALSAVDP AVVKLSGAID DNRAPRAVTD AISALVNLGY GQPQAAAAVA 
TASRTAGEDA ETAQLIKLGL KELSK