| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1287 |
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| Symbol | |
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| ID | 6408944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1358816 |
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| End bp | 1359562 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642711186 |
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| Product | hypothetical protein |
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| Protein accession | YP_001990302 |
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| Protein GI | 192289697 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGGAC ATTCGCAATT CAAGAACATT ATGCACCGCA AGGGCCGCCA GGACGCACAG
CGGTCCAAGC TGTTCAGCAA GCTCGCCCGC GAAATCACCG TCGCTGCCAA GCTCGGCACC
CCGGACCCGG CAATGAACCC CCGGTTGCGG GCGGCGGTGC TTGCGGCGCG TGCGGAAAAC
ATGCCGAAGG ACAACATCGA GCGCGCGATC AAGAAGGCGA TCGGAGGCGA CTCAGAGAAC
TACGACGAGA TCCGCTACGA GGGTTACGGC CCCGGCGGTG TCGCAGTGAT CGTCGAAGCG
CTGACCGACA ACCGCAACCG CGCTGCCAGC GACATCCGCT CGTTCTTCAC CAAGTCCGGC
GGTAACCTCG GTGAAACCGG CTCGGTGTCG TTCATGTTCG ACCGTACCGG GATCATCGAA
TACGACGCCG ACAAGGCTTC CGCCGACGAC ATGCTGGATG CCGCGATTGA AGCCGGCGCG
GACGATGTGG TGTCGTCGGA GGCCGGCCAC GAGATCTATG CGTCCCAGGA AACCTTCCGC
GACGTTGCCA AGGCTCTCGA GGCCAAATTC GGCGAGGCCC GCAAGGCGGC GGTGATCTGG
AAGCCGCAGA ACACGGTCGC GGTCGACGAC GAGACCGGCG AGAAGCTGTT CAAGCTGATG
GACGCCCTCA ACGACCACGA CGACGTCCAG AACGTCTACG CCAACTTCGA AGTCTCTGAC
GCCCTGATGG CGAAGATGGC GGGCTGA
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| Protein sequence | MAGHSQFKNI MHRKGRQDAQ RSKLFSKLAR EITVAAKLGT PDPAMNPRLR AAVLAARAEN
MPKDNIERAI KKAIGGDSEN YDEIRYEGYG PGGVAVIVEA LTDNRNRAAS DIRSFFTKSG
GNLGETGSVS FMFDRTGIIE YDADKASADD MLDAAIEAGA DDVVSSEAGH EIYASQETFR
DVAKALEAKF GEARKAAVIW KPQNTVAVDD ETGEKLFKLM DALNDHDDVQ NVYANFEVSD
ALMAKMAG
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