Gene Rpal_1274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1274 
Symbol 
ID6408931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1348118 
End bp1348609 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content63% 
IMG OID642711173 
Producthypothetical protein 
Protein accessionYP_001990289 
Protein GI192289684 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.915466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCAT CAATGCGAGC GATGCGAGTA GCCGTGCCTC GGGTAGCCGC AGCGATGATC 
GGCGGTGTGG CGTTTGCCGG TGTGGCGTCG GCGCAGTCGG CCGATCTCTA CACCGATTTT
TCCGGCTATC TTGTGAACCC GGCGCAGCAG GGGGCGGTCG CCGACGGCGC GCTGCCGAGC
GGCAGCCACA ATACAGCGAT CGTCAACCAG ACCGGCAACG CGAACTCCGT GACGTCCGAC
GTGCGCGGCT CGTTGAACGT GACGCTGCAG TCGCAGCTCG GCTCCGGCAA TGAGTCCGGC
TTCACCGTCA ACGGCAATCA GAACGTGCTG CACAACAGTC AGATCGGCGA CAACAACAGC
GCCAGGATCG ACGTCACCGG CAACCGCAAC GCCTACAGCA GCACCCAGAT CGGCAGCAAT
CTCAGCTATG GCCTCAGCCA GGTCGGCAAC AATGGCGGGG CCGTCATCGT ACAAATGGGA
GGTCATCGAT GA
 
Protein sequence
MTASMRAMRV AVPRVAAAMI GGVAFAGVAS AQSADLYTDF SGYLVNPAQQ GAVADGALPS 
GSHNTAIVNQ TGNANSVTSD VRGSLNVTLQ SQLGSGNESG FTVNGNQNVL HNSQIGDNNS
ARIDVTGNRN AYSSTQIGSN LSYGLSQVGN NGGAVIVQMG GHR