Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1274 |
Symbol | |
ID | 6408931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1348118 |
End bp | 1348609 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642711173 |
Product | hypothetical protein |
Protein accession | YP_001990289 |
Protein GI | 192289684 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.915466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCAT CAATGCGAGC GATGCGAGTA GCCGTGCCTC GGGTAGCCGC AGCGATGATC GGCGGTGTGG CGTTTGCCGG TGTGGCGTCG GCGCAGTCGG CCGATCTCTA CACCGATTTT TCCGGCTATC TTGTGAACCC GGCGCAGCAG GGGGCGGTCG CCGACGGCGC GCTGCCGAGC GGCAGCCACA ATACAGCGAT CGTCAACCAG ACCGGCAACG CGAACTCCGT GACGTCCGAC GTGCGCGGCT CGTTGAACGT GACGCTGCAG TCGCAGCTCG GCTCCGGCAA TGAGTCCGGC TTCACCGTCA ACGGCAATCA GAACGTGCTG CACAACAGTC AGATCGGCGA CAACAACAGC GCCAGGATCG ACGTCACCGG CAACCGCAAC GCCTACAGCA GCACCCAGAT CGGCAGCAAT CTCAGCTATG GCCTCAGCCA GGTCGGCAAC AATGGCGGGG CCGTCATCGT ACAAATGGGA GGTCATCGAT GA
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Protein sequence | MTASMRAMRV AVPRVAAAMI GGVAFAGVAS AQSADLYTDF SGYLVNPAQQ GAVADGALPS GSHNTAIVNQ TGNANSVTSD VRGSLNVTLQ SQLGSGNESG FTVNGNQNVL HNSQIGDNNS ARIDVTGNRN AYSSTQIGSN LSYGLSQVGN NGGAVIVQMG GHR
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