Gene Rpal_1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1271 
Symbol 
ID6408928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp1345348 
End bp1346001 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content67% 
IMG OID642711170 
Producthypothetical protein 
Protein accessionYP_001990286 
Protein GI192289681 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCGTT TGATCTATGG GGCAGCGCTG GTCTCGAGCT TGGTCGGCGC GGCTCATGCA 
CAGTCTTCAC AGCCCGCTCC GACGTCGAAG CCGGGGGCCG TCAACGTTGA TGGTACTAAA 
TCACCATCGA TCTCCGGGCC GGCAGCCGCC GATTCGCCGA AATGTCCGGA GGCGTGCGTC 
CGCGCCAACA ACGAGAAGGC CTCGGCGATC TGCGCCCGCA AGATCGAGGC GCAGGCTCCG 
GGCGACTTCG AGTGGATCAG CAGGCCGTTC TCCGGCATTT TCCAGCAGGC CGATCCATCC 
AAGCCGGACA ACGCCATCGT CAATTATCGC GGCGACTCGA TCCGCTTCCT GTCGCCGCAG 
AAGGAGTGGG TGCGGGTCTC GTATGAATGC GCCTTCGACG CCGAGCGGGG GACCGTGGTC 
GGCGTCCGCG TCCGCCCCGG CCGGCTCGAC CAGCCAATGG CGCTGCAGGC CCCACCGGGG 
TCGAACGGGC AGCCGCAGCA GACCGGCCCG GTGAAGGCCG GACCGTTGGC CGAGGCCATC 
CTGAAGGCCG CCAAGCAGCG TGGCGCCCAG CCGCAAAAGC CGCCGCCGCC CAAGGTCAGC 
GAACCGAGCC CGATTGACTT TACCCAGATC GATTCCCGCC GCGGCAGTTG GTGA
 
Protein sequence
MMRLIYGAAL VSSLVGAAHA QSSQPAPTSK PGAVNVDGTK SPSISGPAAA DSPKCPEACV 
RANNEKASAI CARKIEAQAP GDFEWISRPF SGIFQQADPS KPDNAIVNYR GDSIRFLSPQ 
KEWVRVSYEC AFDAERGTVV GVRVRPGRLD QPMALQAPPG SNGQPQQTGP VKAGPLAEAI 
LKAAKQRGAQ PQKPPPPKVS EPSPIDFTQI DSRRGSW