| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1270 |
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| Symbol | |
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| ID | 6408926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1344148 |
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| End bp | 1345050 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711168 |
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| Product | amidohydrolase 2 |
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| Protein accession | YP_001990285 |
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| Protein GI | 192289680 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGG CTGATACGTC CAAGGAACCG GCTCCGGCAT GTCCGGGGCC GGATCCGGCC
CCGCGACGGC CGACGCGTTA CGTCGTCCCG CCCGGCGCTG TCGACACGCA CGCCCACGTC
ATCGGGTTGC CGCCGACTTA TCCGTTCGTC GGCGCCCGCA GCTACACGCC GCCCGCCGCA
ACGCCGGAGG CGTATCTGGC GATGCTTGAT GCCACCGGCA TGACCTATGG CGTGGTCGTG
CAGGTCAGCG TGCACGGCAC CGACAATCGG CTGATGCTGG AGACGCTGCA GGCCCACCGC
GATCGGCTGA AGGGCATTGC GGTGATCCCG CTCGGGCTAC CAGACAAGGA ACTGGCGGCG
CTGAAGGATG CCGGCGTCGT CGGCCTCCGC CTGAACATCC TGTATGGCGG CGGCATCGGG
TTTGAGCGCG TCGGCGAATA CGCAGCGATG GCCAAGGAGC TTGGCTGGCA TCTGCAGTTC
CTGATCGACG CCAAGGATCT CGTGCCGCTG GCGCCGCAGC TCGGTGATCT GCCGGTGCCG
TTCATCGTCG ATCATTGGGG GCACTTCCCG GTGTCGCGGG GGATCGATGA TCCAGGCTTC
CAGACGCTGG TGTCGCTGGT CCGCGACGGC GCCTGGGTGA AGCTGTCGGG CGCTTATCGG
AACACGGTCG CGGGATTTCC CTATCTCGAC ACCATTCCGT TTGCCCGCCT GCTGCACGAG
ACGGCGCCTG ATCGTTGCGT CTGGGGCAGC GACTGGCCGC ACGTCGCGAC CTGGACGCAC
ATGATGAACG TCGGCGAGCT GCTCGACCTG CTTGCCGACT GGGTGCCGGA TGCGGCCGCG
CGCGACCGCG TCTTCACCGA CAACGCCTAC CGTCTTTACG GCTTCACACC CACTCGGGCC
TGA
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| Protein sequence | MSKADTSKEP APACPGPDPA PRRPTRYVVP PGAVDTHAHV IGLPPTYPFV GARSYTPPAA
TPEAYLAMLD ATGMTYGVVV QVSVHGTDNR LMLETLQAHR DRLKGIAVIP LGLPDKELAA
LKDAGVVGLR LNILYGGGIG FERVGEYAAM AKELGWHLQF LIDAKDLVPL APQLGDLPVP
FIVDHWGHFP VSRGIDDPGF QTLVSLVRDG AWVKLSGAYR NTVAGFPYLD TIPFARLLHE
TAPDRCVWGS DWPHVATWTH MMNVGELLDL LADWVPDAAA RDRVFTDNAY RLYGFTPTRA
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