Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1267 |
Symbol | |
ID | 6408923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1340615 |
End bp | 1341595 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642711165 |
Product | Sua5/YciO/YrdC/YwlC family protein |
Protein accession | YP_001990282 |
Protein GI | 192289677 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGACC TGATCACCAA GAGGCTGACC GCAGCGGATG CGGACAAAGC CGCGCGCGCG CTGCGCGGCG GTGGGCTGGT CGCGTTCCCG ACCGAGACGG TGTACGGGCT CGGCGCCGAT GCATCGAATG CCGAAGCGGT GGCGCGGCTA TACGCTGCCA AGGGCCGGCC GTCGTTCAAC CCGCTGATCG CGCATGTCGC CGATCTCGAT GCTGCGCGCA CCATCGCAAG GTTCGATGCG GCCGCGCTCC GCCTCGCCGA GGCATTCTGG CCAGGGCCGC TGACGCTGGT GCTGCCGAAG CAGGCGGACT GTTCCGTCTG CGACCTCGCC ACCGCCGGGC TGGACAGCGT CGCGATCCGC ATCCCGTCGC ATCCGGTGGC GCAGGCACTA TTGCGCGCGT TTGGTGGGCC CGTGGTGGCG CCGTCCGCCA ACAGGTCCGG TCACGTGTCG CCGACCACAG CGGCGCATGT CGCTTCCGAT CTCGACGGCC GGATCGATGT GATCGTCGAC GGCGGACCGG TGATGGTCGG CGTCGAGTCG ACGATCGTCA GTTGCCTCGG CGCACCAGTT CTGCTGCGGC CCGGCGGCCT GCCGCGCGAA GCGATCGAGC GCGTACTCGG TCAAGCGCTA GGCACACCGA CGACTAACAA CGCCGACGAT CACGCGCCTC TCGCACCAGG GATGCTGGCG TCGCACTACG CGCCGCGTGC GCTGGTACGG CTGAATGCGA CCGAGGTGAA GCCGGGCGAA GCGCTGCTGG CGTTCGGCCC TGAGTTGCCG CCGGGCGCCG AGACAGCCGC CGCGGTCCAC AACCTCTCGC CGCGCGGTGA CCTCCCCGAA GCCGCAGCAC ATCTGTTCGG CGCGCTTCGC GCGCTCGACG ATCGCGGCGC ACGTGGCATC GCCGTGATGC CGATCCCGTT TCACGGACTC GGCGAAGCGA TCAACGATCG CCTGCGCCGC GCAGCGGCAC CACGCCCATG A
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Protein sequence | MLDLITKRLT AADADKAARA LRGGGLVAFP TETVYGLGAD ASNAEAVARL YAAKGRPSFN PLIAHVADLD AARTIARFDA AALRLAEAFW PGPLTLVLPK QADCSVCDLA TAGLDSVAIR IPSHPVAQAL LRAFGGPVVA PSANRSGHVS PTTAAHVASD LDGRIDVIVD GGPVMVGVES TIVSCLGAPV LLRPGGLPRE AIERVLGQAL GTPTTNNADD HAPLAPGMLA SHYAPRALVR LNATEVKPGE ALLAFGPELP PGAETAAAVH NLSPRGDLPE AAAHLFGALR ALDDRGARGI AVMPIPFHGL GEAINDRLRR AAAPRP
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