Gene Rpal_1267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1267 
Symbol 
ID6408923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1340615 
End bp1341595 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content70% 
IMG OID642711165 
ProductSua5/YciO/YrdC/YwlC family protein 
Protein accessionYP_001990282 
Protein GI192289677 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGACC TGATCACCAA GAGGCTGACC GCAGCGGATG CGGACAAAGC CGCGCGCGCG 
CTGCGCGGCG GTGGGCTGGT CGCGTTCCCG ACCGAGACGG TGTACGGGCT CGGCGCCGAT
GCATCGAATG CCGAAGCGGT GGCGCGGCTA TACGCTGCCA AGGGCCGGCC GTCGTTCAAC
CCGCTGATCG CGCATGTCGC CGATCTCGAT GCTGCGCGCA CCATCGCAAG GTTCGATGCG
GCCGCGCTCC GCCTCGCCGA GGCATTCTGG CCAGGGCCGC TGACGCTGGT GCTGCCGAAG
CAGGCGGACT GTTCCGTCTG CGACCTCGCC ACCGCCGGGC TGGACAGCGT CGCGATCCGC
ATCCCGTCGC ATCCGGTGGC GCAGGCACTA TTGCGCGCGT TTGGTGGGCC CGTGGTGGCG
CCGTCCGCCA ACAGGTCCGG TCACGTGTCG CCGACCACAG CGGCGCATGT CGCTTCCGAT
CTCGACGGCC GGATCGATGT GATCGTCGAC GGCGGACCGG TGATGGTCGG CGTCGAGTCG
ACGATCGTCA GTTGCCTCGG CGCACCAGTT CTGCTGCGGC CCGGCGGCCT GCCGCGCGAA
GCGATCGAGC GCGTACTCGG TCAAGCGCTA GGCACACCGA CGACTAACAA CGCCGACGAT
CACGCGCCTC TCGCACCAGG GATGCTGGCG TCGCACTACG CGCCGCGTGC GCTGGTACGG
CTGAATGCGA CCGAGGTGAA GCCGGGCGAA GCGCTGCTGG CGTTCGGCCC TGAGTTGCCG
CCGGGCGCCG AGACAGCCGC CGCGGTCCAC AACCTCTCGC CGCGCGGTGA CCTCCCCGAA
GCCGCAGCAC ATCTGTTCGG CGCGCTTCGC GCGCTCGACG ATCGCGGCGC ACGTGGCATC
GCCGTGATGC CGATCCCGTT TCACGGACTC GGCGAAGCGA TCAACGATCG CCTGCGCCGC
GCAGCGGCAC CACGCCCATG A
 
Protein sequence
MLDLITKRLT AADADKAARA LRGGGLVAFP TETVYGLGAD ASNAEAVARL YAAKGRPSFN 
PLIAHVADLD AARTIARFDA AALRLAEAFW PGPLTLVLPK QADCSVCDLA TAGLDSVAIR
IPSHPVAQAL LRAFGGPVVA PSANRSGHVS PTTAAHVASD LDGRIDVIVD GGPVMVGVES
TIVSCLGAPV LLRPGGLPRE AIERVLGQAL GTPTTNNADD HAPLAPGMLA SHYAPRALVR
LNATEVKPGE ALLAFGPELP PGAETAAAVH NLSPRGDLPE AAAHLFGALR ALDDRGARGI
AVMPIPFHGL GEAINDRLRR AAAPRP