Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1262 |
Symbol | |
ID | 6408918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1337185 |
End bp | 1337691 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642711160 |
Product | hypothetical protein |
Protein accession | YP_001990277 |
Protein GI | 192289672 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.866294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCCGA TGGCGTCGAG TGAATCCACA GCTGCGCAAA GTGCGCCCTC CCGTTACGAC GAGGCGCGCG CCGCTCAGCT TGCCTCCGCA AATATCAATC CGAAGACAGG GCTCGCCACC GACTACCTCA ATCATTTCAA CGAAGCCGTG ATGCTGCTCG AAATGATTCC GGACATGCCG GAGTGCTCGG AAGACTTCCT GTCCTGGCAT CCCCTCTCCT ACGCGGAGCA CTTCAAGGCC TCGAACTTCA AGGCCCGCGA TCTCGCGATC GAAGCCTATG ACACGGCCGA TCCCGGGATT AGATCGGATT TCGACGACAT CACCAACAAT ATGACGGCGA TCCTCACCGC GGTCGGCGAG GCGATGCGCC AAGCCTCGCA GGACGCCACC CGGGCCAAGC TCGCCGAGAG CGCGGTCGGC TGGATCAAGC CGTTGATCGG TCGCGCCGGC GGCATCATCA ACGGCCAAGG CTGCGAAGCC GACGTCGACT ACATCATGGC GCATTGA
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Protein sequence | MPPMASSEST AAQSAPSRYD EARAAQLASA NINPKTGLAT DYLNHFNEAV MLLEMIPDMP ECSEDFLSWH PLSYAEHFKA SNFKARDLAI EAYDTADPGI RSDFDDITNN MTAILTAVGE AMRQASQDAT RAKLAESAVG WIKPLIGRAG GIINGQGCEA DVDYIMAH
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