| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1261 |
|---|
| Symbol | |
|---|
| ID | 6408917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 1336745 |
|---|
| End bp | 1337188 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642711159 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001990276 |
|---|
| Protein GI | 192289671 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.394929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACGCCG TGACCGAAGC CGCACCGGCG CAGCCGCGCC ATCCGCAATT GGCCGTCAGC
GCCGCGATCT TCCGCGAGGG CCGCCTTCTG CTGGTTCGCC GGGCGCGAAT GCCGGGCAAA
GGCCTGTATT CGCTGCCCGG TGGCCGGGTC GAATTCGGCG AGACGCTGGA GCAGGCGGCG
GTGCGCGAAG TTGCCGAGGA AACCGCGCTG TCGATCCAGA TCGTCGGCCT TGCCGGCCGG
CGCGAGGTGC TGCCTTCCGC CGCCAGTGCA GCCGGGCATT ACGTCATCAT GGTGTTCGCC
GCGCGCTGGG CCGGCGGTGA GCCGCAGCTC AATGGCGAAC TCGATGACGC CCGCTGGATC
GGCCCTGATC AACTGGCCAA CTTTTCGACC ACCGAGGGGC TGGCCGAGCT GGTTGAAGGC
GCCCGCGAGC TGATCGGAAC CTGA
|
|---|
| Protein sequence | MNAVTEAAPA QPRHPQLAVS AAIFREGRLL LVRRARMPGK GLYSLPGGRV EFGETLEQAA
VREVAEETAL SIQIVGLAGR REVLPSAASA AGHYVIMVFA ARWAGGEPQL NGELDDARWI
GPDQLANFST TEGLAELVEG ARELIGT
|
|---|
| |