Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1260 |
Symbol | |
ID | 6408916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1336305 |
End bp | 1336682 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642711158 |
Product | hypothetical protein |
Protein accession | YP_001990275 |
Protein GI | 192289670 |
COG category | [S] Function unknown |
COG ID | [COG5451] Predicted secreted protein |
TIGRFAM ID | [TIGR02301] conserved hypothetical protein TIGR02301 |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.357949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAAGC GTTCCCTTGC CGTGCTGATG ATCCTCGCCT GCTGCGGGCT CGTCCCGGCG CGCGCCGAGG ACGGCGCGGC GCCGTTCGAC GCCGAATTGC AGCGCCTCGC CGAGATTCTC GGGACGCTGC ATTATCTCAG AGGGATCTGC GGCGGTAGCG ACGGCGCCAA ATGGCGCTCC GAGATGCAGG CGCTGATCGA CGCCGAGACC CCCTCGGGCG AGCGCCGGAC CCGGCTGATC GCGGCGTTCA ATCGGGGTTA CAATGGGTTC CAGCAGACCT ACCGGACTTG CACGCCGGCC GCGACCGTGG CGATTCGGCG GTACCTGGAG GAAGGTTCGA AGCTGTCGCG GGACCTGACC GCTCGATACG CGAACTGA
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Protein sequence | MLKRSLAVLM ILACCGLVPA RAEDGAAPFD AELQRLAEIL GTLHYLRGIC GGSDGAKWRS EMQALIDAET PSGERRTRLI AAFNRGYNGF QQTYRTCTPA ATVAIRRYLE EGSKLSRDLT ARYAN
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