Gene Rpal_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1260 
Symbol 
ID6408916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1336305 
End bp1336682 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content67% 
IMG OID642711158 
Producthypothetical protein 
Protein accessionYP_001990275 
Protein GI192289670 
COG category[S] Function unknown 
COG ID[COG5451] Predicted secreted protein 
TIGRFAM ID[TIGR02301] conserved hypothetical protein TIGR02301 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.357949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAGC GTTCCCTTGC CGTGCTGATG ATCCTCGCCT GCTGCGGGCT CGTCCCGGCG 
CGCGCCGAGG ACGGCGCGGC GCCGTTCGAC GCCGAATTGC AGCGCCTCGC CGAGATTCTC
GGGACGCTGC ATTATCTCAG AGGGATCTGC GGCGGTAGCG ACGGCGCCAA ATGGCGCTCC
GAGATGCAGG CGCTGATCGA CGCCGAGACC CCCTCGGGCG AGCGCCGGAC CCGGCTGATC
GCGGCGTTCA ATCGGGGTTA CAATGGGTTC CAGCAGACCT ACCGGACTTG CACGCCGGCC
GCGACCGTGG CGATTCGGCG GTACCTGGAG GAAGGTTCGA AGCTGTCGCG GGACCTGACC
GCTCGATACG CGAACTGA
 
Protein sequence
MLKRSLAVLM ILACCGLVPA RAEDGAAPFD AELQRLAEIL GTLHYLRGIC GGSDGAKWRS 
EMQALIDAET PSGERRTRLI AAFNRGYNGF QQTYRTCTPA ATVAIRRYLE EGSKLSRDLT
ARYAN