Gene Rpal_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1253 
Symbol 
ID6408909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp1331238 
End bp1331855 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content67% 
IMG OID642711151 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001990268 
Protein GI192289663 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.679773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTCTT CGCCGAAGAA ATCGTCGCAA GCCTCCAGCC GCGTCTGGCA GCGGATGCTG 
TCCGGCCGCA GGCTCGATTT GCTCGATCCC TCGCCGCTCG ACGTCGAATT CGCCGACATC 
GCCCATGGTC TCGCTCGGGT GGCGCGGTGG AACGGCCAGA CCAGCGGCTC CCACATCTTT 
TCGGTGGCGC AGCACACCCT GCTGGTCGAG GCGGTGATGC GCGAGAAGAA CCCTCGGATC 
GACGCCAAGC TGCGGCTCGC CGCGCTGCTG CACGACGCCC CGGAATACGT GATCGGCGAC 
ATGATCTCGC CCTTCAAAGC GGTGATCGGC GAATCCTACA AGCGGGTCGA AAAGCGCCTG 
CTCGGCGCGA TCCACATCCG ATTCGGCCTG CCGGCGGTGC TGGATGAGGC GATCGAACGC 
CAGATCAAGG CCGCCGACCG CGGCTCCGCC TACCTCGAAG CGACTCACCT CGCCGGCTTC 
ACCAAGGCCG AGGCCAAGCG GCTGTTCGGC AACGATCCGG GCCTGCCGGA GGCGATGGTC 
GAGGACTATC TGACGCCCTG GCCGGCCGGA AAGGCCGAAA AGCGGTTGCT GGCCCGGTTC 
GAGAGCCTGC AGGCTTGA
 
Protein sequence
MPSSPKKSSQ ASSRVWQRML SGRRLDLLDP SPLDVEFADI AHGLARVARW NGQTSGSHIF 
SVAQHTLLVE AVMREKNPRI DAKLRLAALL HDAPEYVIGD MISPFKAVIG ESYKRVEKRL 
LGAIHIRFGL PAVLDEAIER QIKAADRGSA YLEATHLAGF TKAEAKRLFG NDPGLPEAMV 
EDYLTPWPAG KAEKRLLARF ESLQA