| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1247 |
|---|
| Symbol | |
|---|
| ID | 6408903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 1323755 |
|---|
| End bp | 1324867 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642711145 |
|---|
| Product | quinolinate synthetase |
|---|
| Protein accession | YP_001990262 |
|---|
| Protein GI | 192289657 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0379] Quinolinate synthase |
|---|
| TIGRFAM ID | [TIGR00550] quinolinate synthetase complex, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTTG CTGAACTCTA CGGTCCGGAG AATTTCGGCC TGCCGCCGCA TGCGCGCCAA
GGATCGCTTC CGCGCGCGCC GCTGAGTGCC ACTGAACGCG CCCGCGCGCT CCCGATGCCG
TCCTTGGAAT GGACGCCGGA GGTCGAGGCC GCGACCGCGC ACCTGTACGA GAAGGTGCAG
ACCGTCATTC CGCCGGTCGA GTGGCCGTTC ATGGCGCCCT ACGTCAAAGC GATCAACGAG
CTGAAGCGCG AGCGCGACGC CGTGATCCTG GCGCACAACT ACCAGACGCC GGAAATCTTC
CACTGCGTCG CCGACATCGT CGGCGACTCG CTGCAACTCG CGATCGAAGC CACCAAGGTG
AAAGCTTCGA CCATCGTGCA GTGTGGCGTG CACTTCATGG CCGAGACGTC GAAGATCCTG
AATCCGGAGA AGCGCGTGCT GATCCCGGAT TCCCGCGCTG GCTGCTCGCT CGCCTCTTCC
ATCACCGGTG CCGACGTTCG GCTGCTGCGC GAGAAATTCC CCGGCGTGCC GGTGGTCGCT
TATGTCAACA CCTCGGCCGA CGTGAAGGCT GAGGTCGATA TCTGCTGCAC CTCGTCGAAC
GCCGTGCAGG TGGTCGAAAG CCTCGGCGTC GACCGCGTCA TCATGGTGCC GGACCAGTAT
CTGGCGAAGT ACGTCGCCTC CCAGACCAAG GTGAAGATCA TCGCCTGGAA GGGCGCCTGC
GAGGTCCACG AGCGCTTCAC CGGCGACGAG CTGCGCGTCT ATCGCGAGGC AGATCCGAAC
GTGAAGATCA TCGCGCATCC GGAGTGTCCG CCGGATGTAC TGGCCGAAGC CGACTTCACC
GGCTCGACCG CGCACATGAT CAACTGGGTC AAGACCCAGC ATCCGAAGCG CGTGGTGATG
ATCACCGAGT GCTCGATGGC CGACAACGTC CAGGCCGAGC TGCGCGACGT CGAAATGGTG
CGGCCGTGCA ATCTATGCCC GCACATGAAG CGGATCACGC TGGCGAAGAT CCTCGACAGT
CTGGTGTATC TGCGTGAGGA AGTGACGGTC GATCCCGCCA TCATCGCGCC GGCCCGGCGC
TCGGTGGAGC GGATGATCAA CCTGAACAAC TGA
|
|---|
| Protein sequence | MPLAELYGPE NFGLPPHARQ GSLPRAPLSA TERARALPMP SLEWTPEVEA ATAHLYEKVQ
TVIPPVEWPF MAPYVKAINE LKRERDAVIL AHNYQTPEIF HCVADIVGDS LQLAIEATKV
KASTIVQCGV HFMAETSKIL NPEKRVLIPD SRAGCSLASS ITGADVRLLR EKFPGVPVVA
YVNTSADVKA EVDICCTSSN AVQVVESLGV DRVIMVPDQY LAKYVASQTK VKIIAWKGAC
EVHERFTGDE LRVYREADPN VKIIAHPECP PDVLAEADFT GSTAHMINWV KTQHPKRVVM
ITECSMADNV QAELRDVEMV RPCNLCPHMK RITLAKILDS LVYLREEVTV DPAIIAPARR
SVERMINLNN
|
|---|
| |