| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1244 |
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| Symbol | |
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| ID | 6408900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1319165 |
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| End bp | 1320595 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711142 |
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| Product | cell wall hydrolase SleB |
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| Protein accession | YP_001990259 |
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| Protein GI | 192289654 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.445074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGTCA TGCGTAACCG GTCGAAGGGC GCGCGGATTG CGTCCTTCGG CCTCGGGGTT
TGTGTCTTCG CGGCGCTGCC CAACGAAATC GGACACCAGG ATATTGCGTC GCTGCTGGTT
CGGCAGACGG GCGTCACCGA GCGTTGGCAG AAGCGGATGT TCGCGTCCTC GCTCGGCTCG
GTGCAGGTCG CGACGTTCTC GTTCGGCCGG CCGCTCGGAA CCTGGACGCC GCAGCTCGGC
TCCTCGCGCC TGGTCAGCAT CGAAGGCCGC AGCGGCGGTC TCGCCGCCAC TCGCAATCCG
CTGCTGCAGG CGCCGTCCCG TTACCAGGCT TCCGACTACC CGAAGGTCGA CCGCACCCTG
AAGGGCGACC GCCTCGCGCT CGCTCGGCCC GACCAGTCGC CGACCCTCGA AGTTGCGCCT
ACGCCGGAGG ACGCCGGCTC GCAGGCGCCC AACGTCGCCG GCGGTAAGAC TGCCGAACAG
TTCCCGAGTT CCGATCAGAA CGGCGCGGTC CACGCGGCCG AAGCCTCGCC GGCGCTCGAT
CCGGAGCTCG CCGAAGCGCT GAAGTCCGAG CCGCTGCCGC AATACGACGG CTCGCTGTCG
CTCGATAAGG ACCACGAGGC GGCCACTGTC GCGCCGCGGC CGCGCGATCC GTTCTCGTTC
AAGACTGCCA GCCTGTTCTT CGGCACCGGC TCGCTCGGCG GCATGGATGA ATCCCTCGAG
CAGTGGCAGC CGGGCGAAGA GCCGATCATC GTGTCGCCGA ACGCGGCCGA TCCCGACATG
AAGTCGCCGC TGCCGCAAAC CGCTGCGCTG GATCCGTCCG CTTCGGGCGA AACCATCGCC
GGCAAGGGCC AGGTCAACGT CGATCACCAC GTCAAGACGC CCGCCGAGCG GCTCGGCCTC
GCCAATGACT CCAAGCTGCG CGCCAAGCAC GAGAAGTGCC TGGCGGAGGC AGTGTATTTC
GAATCACGCG GCGAAAAGGT GCGCGGCCAG ATCGCGGTGG CGCAGGTGGT GCTCAACCGC
GCGTTCTCCG GCTTCTATCC GACCAACGTC TGCGGCGTGG TCTATCAGAA CAAGAACCGC
CGCTACGCCT GCCAGTTCAC CTTCGCCTGC GACAACATCG CCGACGTGGT GCGTGAGCCG
GAGATGTGGG ACCGCGCCCG CAAGATTGCG CGCGCGATGC TCGACGGCAA GCTGTGGCTG
CCCGAAGTCG GCAAGTCGAC TCACTACCAC GCTTATTGGG TGCGCCCGTC CTGGGTCCAC
GAGATGAAGA AGATGTACAA GTTCGGCGTA CACACCTTCT ATCGTCCGCG CGCCTGGGGC
GACGGCAGCG ACGCCCCGAG CTGGGGCACT GCCGCAGAAA CCGCCTCGAT CGCCGCCCAA
CTCGCCGAAG CCGCCAAGAG CTCGGCGGAG ATTCAAGCGA AGGGCAACTA A
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| Protein sequence | MSVMRNRSKG ARIASFGLGV CVFAALPNEI GHQDIASLLV RQTGVTERWQ KRMFASSLGS
VQVATFSFGR PLGTWTPQLG SSRLVSIEGR SGGLAATRNP LLQAPSRYQA SDYPKVDRTL
KGDRLALARP DQSPTLEVAP TPEDAGSQAP NVAGGKTAEQ FPSSDQNGAV HAAEASPALD
PELAEALKSE PLPQYDGSLS LDKDHEAATV APRPRDPFSF KTASLFFGTG SLGGMDESLE
QWQPGEEPII VSPNAADPDM KSPLPQTAAL DPSASGETIA GKGQVNVDHH VKTPAERLGL
ANDSKLRAKH EKCLAEAVYF ESRGEKVRGQ IAVAQVVLNR AFSGFYPTNV CGVVYQNKNR
RYACQFTFAC DNIADVVREP EMWDRARKIA RAMLDGKLWL PEVGKSTHYH AYWVRPSWVH
EMKKMYKFGV HTFYRPRAWG DGSDAPSWGT AAETASIAAQ LAEAAKSSAE IQAKGN
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