| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1219 |
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| Symbol | |
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| ID | 6408875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1289477 |
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| End bp | 1290394 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711117 |
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| Product | protein of unknown function zinc metallopeptidase putative |
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| Protein accession | YP_001990234 |
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| Protein GI | 192289629 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2321] Predicted metalloprotease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTCG ATGATTTCCG TCGCAGCGAC AATATCGACG ACCGCCGGGA CCAGGAGGGC
GGCGGTGGTG GTGGTGGTGG CGGATTTCCG ATGGGCGGCG GCGGTCTCGG TATCGGCACC
ATCGTGGTGC TGGGTATCGT CGGCTGGGCG CTCGGCATCG ATCCGCGGCT GCTGATCAGC
GGCGCCGAGA TGATCTCGGA GACGACGCAG CATCATCAGG CCGACAGCCG GCCCAGCAAG
CAGGGCGCGC CGACCGACGA GGTCGGCAGC ATGATTTCCG GCGTGCTGGG CGAGATCGAC
GATCGCTGGA CCGAAATCTT CAAGGCTAAC GGTCAGACCT ATGTCGGGCC GAAGATCGTG
CTGTTCCGCG GCCGCACCAA TGGCGGGCGC TGCGGCATGG CTCAGGCGGC GATGGGGCCG
TTCTATTGTC CGCCCGACCG GCAGATCTAC ATCGACACCT CGTTCTTCAA GCAGGTCGAG
ACCCGCTTCC GCGGCTGTTC TGGGTCGGCC TGTCAGTTCA CTGCCGCTTA CATCATCGCG
CACGAGGCCG GCCATCACGT CCAGAACCTG CTCGGCATTC TGCCGAAGGT GACGCGGGCT
CAAGAGGCGG CCGGCTCGCG CGCCGAAGCC AATGCGCTGC AGGTGCGCGT CGAGCTGCAG
GCCGACTGCC TGTCCGGCGT CTGGGTCAAT CGCGAAAAGA AGAAGCGTCC GAACTTCCTC
GAGGACGGCG ACATCGACGC CGCACTCACC ACCGCGGCCG CGATCGGCGA CGACACCCTG
CAGCGCCGCG CCGGCCGCGA CGTCGTGCCG GACTCCTTCA CCCACGGCTC CGCCGAACAG
CGCAAGCGCT GGTTCATGAC CGGCTATCAG CAGGGCACCG TCCAGGCCTG CAACACCTTT
GCGGCGGAGA AGCTGTAA
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| Protein sequence | MRFDDFRRSD NIDDRRDQEG GGGGGGGGFP MGGGGLGIGT IVVLGIVGWA LGIDPRLLIS
GAEMISETTQ HHQADSRPSK QGAPTDEVGS MISGVLGEID DRWTEIFKAN GQTYVGPKIV
LFRGRTNGGR CGMAQAAMGP FYCPPDRQIY IDTSFFKQVE TRFRGCSGSA CQFTAAYIIA
HEAGHHVQNL LGILPKVTRA QEAAGSRAEA NALQVRVELQ ADCLSGVWVN REKKKRPNFL
EDGDIDAALT TAAAIGDDTL QRRAGRDVVP DSFTHGSAEQ RKRWFMTGYQ QGTVQACNTF
AAEKL
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