Gene Rpal_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1218 
Symbol 
ID6408874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp1287967 
End bp1289097 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content63% 
IMG OID642711116 
ProductDNA methylase N-4/N-6 domain protein 
Protein accessionYP_001990233 
Protein GI192289628 
COG category[L] Replication, recombination and repair 
COG ID[COG0863] DNA modification methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGTGT CGCGTCGCGG GGCGTCTGCA AGGGCGCCCC GCACTCAATT TGAAGATATG 
CCCGAGAGCC GAATCATCGT CGGTGATTGC ATCGCCGAGA TGGAGAAGCT CCCGCCGAAG 
TCGGTGGATC TGGTGTTCGC CGATCCGCCG TACAATCTGC AGCTCAAAGG TGCGCTGAAA 
CGTCCCGACG AATCGGAAGT CGACGCCGTC GACGACGATT GGGACAAGTT CGCGTCCTTC 
GCCGCTTACG ACAACTTCAC CCGTGCGTGG CTGCTCGCCG CGCGACGGAT CATGAAGCCG 
TCGGCGACAC TGTGGGTGAT CGGCTCGTAC CACAACATTT TCCGCGTCGG CACGATCATG 
CAGGACCTCG GGTTCTGGGT GCTCAACGAC ATCGTTTGGC GCAAGTCCAA TCCGATGCCG 
AACTTCCGCG GCCGCCGTTT CACCAATGCG CACGAAACCA TGATCTGGGC CGCGCGCGAC 
GAGAACGCCA AGGGCTACAC CTTCAACTAC GATGCGTTGA AGGCCGCCAA CGAGGACGTT 
CAGGCGCGCT CGGACTGGCT GATTCCGCTG TGCACCGGCG ACGAACGGTT GAAGGGCAAG 
GACGGCAAGA AGGTGCACCC GACGCAGAAG CCCGAACAGC TTCTGGCGCG CGTGCTGTTG 
AGCTCGTCGA AGCCGGGCGA TCTGGTGGTC GATCCGTTCA ACGGCACCGG CACCACAGGT 
GCTGTCGCCA AGCGTTTGCG CCGCAACTAC ATCGGCATCG AGCGCGACAA GACCTACGCC 
GAAGCTGCAC GTGCGCGGAT CGATTCGATC GAACCGCTGC CGGACGACAC GCTGAAGCCT 
TTCCTCACCG CGCGCGATGC GCCGCGAGTG GCGTTCTCCG AGCTGATCGA GCGCGGCATG 
ATTTCGCCGG GCGCACGATT AGTCGATTCG AAGAAGCGGC ACGGCGCACT GGTGCGCGCC 
GACGGCGCCA TCATGCTCGG CGACAAGGTC GGATCGATTC ACCGAATCGG TGCAGTGGCC 
CAGGGGTCGG AGGCCTGCAA CGGCTGGACG TTCTGGCACG TCGAAACCAG CAAGGGTCTG 
CGGCTGATCG ACGAACTCCG CGCCGAGATT CGCAGCACGA TGATCGCCTG A
 
Protein sequence
MVVSRRGASA RAPRTQFEDM PESRIIVGDC IAEMEKLPPK SVDLVFADPP YNLQLKGALK 
RPDESEVDAV DDDWDKFASF AAYDNFTRAW LLAARRIMKP SATLWVIGSY HNIFRVGTIM 
QDLGFWVLND IVWRKSNPMP NFRGRRFTNA HETMIWAARD ENAKGYTFNY DALKAANEDV 
QARSDWLIPL CTGDERLKGK DGKKVHPTQK PEQLLARVLL SSSKPGDLVV DPFNGTGTTG 
AVAKRLRRNY IGIERDKTYA EAARARIDSI EPLPDDTLKP FLTARDAPRV AFSELIERGM 
ISPGARLVDS KKRHGALVRA DGAIMLGDKV GSIHRIGAVA QGSEACNGWT FWHVETSKGL 
RLIDELRAEI RSTMIA