| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1217 |
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| Symbol | |
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| ID | 6408873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1287502 |
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| End bp | 1287867 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711115 |
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| Product | cytochrome b5 |
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| Protein accession | YP_001990232 |
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| Protein GI | 192289627 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG5274] Cytochrome b involved in lipid metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.832153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGCGCA AGCTGTTCTA CGTCTCGACC GCCGCGTTCT GGATCGCCGT CGCCGGTTTC
TGGATCGCCA ATCTCCTGGT GCCGGGCGCC GACACCATGG CGACCGCCGC CGAGCGCGAG
ATCGGCGCCG CCGAATTGGC GAAGCATGCG GTGCCGCAGG ATTGCTGGAT GGCGATTCGC
GGCAACGTCT ACGACATCAC GGCGTATCTG CCGGATCATC CGTCGCGGCC GAGCATCATC
GAGCCGTGGT GCGGCAAGGA AGCGACCGAG GCATACGACA CCAAGACCAA GGGTCGTAAG
CACTCGTCCG AAGCCGACGC GCTGCTGCCG AAGTACCGAA TCGGACGGTT CATCGGCGGA
AGCTAG
|
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| Protein sequence | MMRKLFYVST AAFWIAVAGF WIANLLVPGA DTMATAAERE IGAAELAKHA VPQDCWMAIR
GNVYDITAYL PDHPSRPSII EPWCGKEATE AYDTKTKGRK HSSEADALLP KYRIGRFIGG
S
|
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