| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1216 |
|---|
| Symbol | |
|---|
| ID | 6408872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 1286243 |
|---|
| End bp | 1287505 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642711114 |
|---|
| Product | Ferric reductase domain protein transmembrane component domain |
|---|
| Protein accession | YP_001990231 |
|---|
| Protein GI | 192289626 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4097] Predicted ferric reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTGGCCG CCGCTGCAGC GCTGCGCAGG TGGTCGATCC CGCTGCTGAG CTGCGCGGTG
CCGGCAGGCT TCGCGGTGTG GGCATTTCCC GAAGGTCTGG CGCCGGTTCG CGCCGCGGGC
ATCATCACCG GCTGGCTCGG CTGCGGCTTG TTGCTGGTCA GTCTGCTGCT GATGCTGCGC
GAGCCACGGC TTGCGGCGTG GCTGGGTGGC CTGGAGCGAA TGTATCGCTG GCACCACGCC
ACAGGACTGG CGGCCTATCT GTTCCTGTTG CTGCATCCGC TGCTGCTCGC CGCCAACAAC
TTGTCGTCGC CGCGGGTCGC CTGGCAGACG CTGTCGCCGT TCACCGAAAG CTGGCCGGTG
TGGTCCGGCT GGCTCGGGCT ACTGCTGCTG ATGGGCGGCC TCGTCACCAC CTTCATCCGC
CGCATCCGCT ACGGCACGTG GCGCTGGCTG CATGCGCTGC TCGGCCTCGG CGTGCTGACC
GGGCTGGTGC ATCTGATCCT GCTCGGCATC GATGAGCCTG TGCTGCCGAT CCTTGCGGTC
GCAGCGGGGA TTCTCGGTTG GCGGCTGATC CGCGGCGATC TTGGGCTTGC GGCGCGGCCC
TATGTGGTGA CGTCTGCGCT GCCACTCGCG GCGCGCTCGA TCGAGGTGGT GCTGCGTCCG
CTCGGTGATC CGGCGATGGT GACGCCCGGC CAGTTTGTCC TCGTGGAATT CGGCAACGGC
GACTGCTATC GCGGCTGCGG CGAATTTCAT CCCTTCACGG TCAGCACGAT CGCGGGCCAG
GACGAGCTGC ATCTCGCCGT CAAGGCGCTC GGGGACTGCA CCACCCGGAT GCAGGCGATC
GAGCCCGGCG TTGCAGCCCG CGTGATTGGC GGTTTCGGCG GCTTCGTCGA TTCGCACGGA
AGGGCGCCGC AGTTCTGGGT GGCAGGCGGG ATCGGCGTCA CGCCTTTCGT TGCTTTGCTG
AACGCCGGCC CGCTGCTGCA TCCGACGCGG CTGCTGTATC TGTATCGCTG CGAAGCTGAT
GCGGCGTTTC TGCCGGAGCT GCGCGCGACT GCGGCGGCTG ATCCGAAGTT TACGCTCCAT
GCCGTTGAGA CCGGTGACGG TGTTCCCGAT CTCGGCCCGC TGCTGCCGCC CGCCGGCGAG
TTGTCGGGCG CCGAGTGTTA TTTGTGCGGA CCGCCCGGTC TGGTCGCCGC ATTGAAATCG
GCGCTCGCTG CACGTGGCGT CACCGCTCAG CATGTCCACT ACGAGAATTT CGAGTTCAGA
TGA
|
|---|
| Protein sequence | MVAAAAALRR WSIPLLSCAV PAGFAVWAFP EGLAPVRAAG IITGWLGCGL LLVSLLLMLR
EPRLAAWLGG LERMYRWHHA TGLAAYLFLL LHPLLLAANN LSSPRVAWQT LSPFTESWPV
WSGWLGLLLL MGGLVTTFIR RIRYGTWRWL HALLGLGVLT GLVHLILLGI DEPVLPILAV
AAGILGWRLI RGDLGLAARP YVVTSALPLA ARSIEVVLRP LGDPAMVTPG QFVLVEFGNG
DCYRGCGEFH PFTVSTIAGQ DELHLAVKAL GDCTTRMQAI EPGVAARVIG GFGGFVDSHG
RAPQFWVAGG IGVTPFVALL NAGPLLHPTR LLYLYRCEAD AAFLPELRAT AAADPKFTLH
AVETGDGVPD LGPLLPPAGE LSGAECYLCG PPGLVAALKS ALAARGVTAQ HVHYENFEFR
|
|---|
| |