Gene Rpal_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1208 
Symbol 
ID6408864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1278806 
End bp1279339 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content67% 
IMG OID642711106 
Productubiquinol-cytochrome c reductase, iron-sulfur subunit 
Protein accessionYP_001990223 
Protein GI192289618 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCTA TTACGTCTGA ACAACCGAGC CGCCGTGACG TGTTGTACTT GGCGACCGGG 
GCCCTGGCTG CGGTCGGCAC CGCCGCGATG GTGTGGCCGT TCGTATCCCA GCTCAATCCC 
GACGCCGGCA CGGTTGCGGC CGGCTTCCCG CTCGAAGTCG ACCTGGCGCC GATCTCGGAA 
GGGCAGGTCG TGAAAGTGTT CTGGCGCGGC CAACCGATCT TCATCAGCCA CCGCACGCCG 
AAGGAAATCC AGTCGGCGCA GTCCGCCGAT TGGCAAAGCT TCCGTGATCC GGAGCCGGAC 
TCGGCCCGCG TCAAGCCCGG CAAGGAGCAG TGGCTGGTGG TGTCGGCGAT CTGCACCCAC 
CTCGGCTGCG TGCCGACCGA GCATCAGGGC AACTACGACG GCTGGTTCTG CCAGTGCCAC 
GGCTCGCAGT ACGACTCCGC CGGCCGTATC CGGCTCGGGC CGGCGCCGCG CAACCTGCCG 
CTGGTGCCCT ACAAGTTCGC CACCGACACG CAGATCATTA TCGGCGAGAC CTGA
 
Protein sequence
MTAITSEQPS RRDVLYLATG ALAAVGTAAM VWPFVSQLNP DAGTVAAGFP LEVDLAPISE 
GQVVKVFWRG QPIFISHRTP KEIQSAQSAD WQSFRDPEPD SARVKPGKEQ WLVVSAICTH 
LGCVPTEHQG NYDGWFCQCH GSQYDSAGRI RLGPAPRNLP LVPYKFATDT QIIIGET