Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1197 |
Symbol | |
ID | 6408853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1267838 |
End bp | 1268488 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642711095 |
Product | NUDIX hydrolase |
Protein accession | YP_001990212 |
Protein GI | 192289607 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGAGG TCGATTTTCC GACGACGAAG GGCGATAAGT TGCGAACTCC GGTGCTGGCA GCAGGCGGAA TCGTGTTGCG GCGCGGCAAA GATCCGCTGT TCGCGGTCGT CCGGATGCGC AAGCGCAACG ATTGGGTGCT GCCCAAGGGC AAGCTCGATC ATGGTGAGAC GCCACGCCAG GCCGCCGAGC GCGAGGTGCT GGAAGAGACC GGCCACGTCG TTGCGGTCCA CGAATTCATC GGCACGCTCG CCTATGACTC CGGCGGCCGT TCCAAGGTGG TGCATTTCTG GCGGATGGAG GCCGAGCCAC GGCAGACCCT GCCGCTGATG AAGGACATCC GCGCGGTCGA TTGGTTGCCG CTCGACGAGG CGCTGCAGCG GCTGTCGCGC AGCTACGAGC AGGCGTTTCT GACCGAGGTG GGCCCATTGG TGCTGGAATC GGCTGGCCAC TTCCTGTCGG CAGCCCCCGC CGCGCCGCCG CCACCGCGCT GCCCGACCAG TCCGTTGCCG ACCGGGGACG AGATCGTCAC CGACCTTGCC GAAGCTCCGT CGTTGGCGCT CGAACAACCA TCCGAAGCGC TCGAACCGCA GCCGCCGCTG TCGATGCTGC AACGACTGCG ACGATGGCTG CGGGGGCAGT CCCGCTCCTG A
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Protein sequence | MVEVDFPTTK GDKLRTPVLA AGGIVLRRGK DPLFAVVRMR KRNDWVLPKG KLDHGETPRQ AAEREVLEET GHVVAVHEFI GTLAYDSGGR SKVVHFWRME AEPRQTLPLM KDIRAVDWLP LDEALQRLSR SYEQAFLTEV GPLVLESAGH FLSAAPAAPP PPRCPTSPLP TGDEIVTDLA EAPSLALEQP SEALEPQPPL SMLQRLRRWL RGQSRS
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