| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1195 |
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| Symbol | |
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| ID | 6408851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1265675 |
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| End bp | 1267309 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711093 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001990210 |
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| Protein GI | 192289605 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTTCT GGCCCGAGGC CGGCATCGGT GGCGCGCTGC GCCGCGAGAC TCACTACGAC
GGCCGGTCGA TGCTGTGCTT CTCCGAGCGC CCCGCTCATC TCGCAGCCAT GTTCGACGAT
CTGGTCGCGC GATTCGGCGA CCGTCCGGCG ATCGTCGACG ACCGCGCGCT CAGCTATCGC
GAGCTCGATC TGCTGGTTCG CAAGATCGCG GTGTCGCTGG CCGCACTCGG CATTAGCAAG
GGCGACCGCG TCGCACTGTT CCTCGGCAAT TGCTGGGAGT TCCTGGCGGT GACGCTCGCC
TGCAACCGGC TCGGCGTCCT GGTAGTCCCG ATCGGCATCC GGCAGCGCCG CGCCGAACTC
GAATTCCTGT TGAACAACAG CGGCGCCAAG GTGGTGGTGT TCGAGGCGGA GCTGACTGAC
GAGATCCCGG CAGCCGCCGA AGTGCCACAG CTCGCGCATC GCTTCGTCGC GCACGGAACC
GCCGAGGGCG CGCGGCCGTT CGAGGATCTG CTCGCCGCCG AGCCGGCGAA CGCGCCGCTC
GCAGAGATGC ACGAAGACGA TACCGCGGTG ATCCTCTACA CCTCGGGCAC CACCGGCAAA
CCGAAGGGCG CCGAGCTGAC TCATCTCAGC ATCCTGCATT CATCCTACGC GTTCGCGCGC
GCCCACGAGC TGACTGAACG CGACCGCGGC CTGGTCGCGG TGCCGCTGTC GCATGTGACA
GGCCTCGTCG GCGTATCCTA TGCAACGATC GCGGCCGGCG GCTGCGTTGT GCTGATGCGG
CAGGCGTTCA AGACCGCCGA CTTCCTCGCC CTCGCAGCGC GCGAGCGGAT CACCTATTCG
ATCCTGGTGC CGGCGATCTA CACACTCGCG GTGATGCATC CGGAGTTCGA CAAGCACGAT
CTGTCGGCCT GGCGGATCGG CTGCTTCGGC GGCGCGCCGA TGCCGGTACC GACCATCGAG
ATGCTGAGCA AGCGACTGCC GAACCTGCAG CTCCGCAACG CCTACGGCGC GACCGAGACC
ACCTCGCCGA CCACGATCAT GCCGCAGGCG TATTGGCGTG ATCACATGGA CAGCGTCGGC
CAGGCGATTC CTTACGCGCA TGTCCGCGTG CTCGACGCCG ACGACAACGA GGTCGCACCC
GGTGAGCCCG GCGAACTCCT GATCGCCGGC CCGATGGTGG TGCCGCGCTA TTGGCAGCGT
CCCGATGCCA ACGCCAAGGA GTTTGTGAAC GGCTACTGGC GCAGCGGCGA CATCGGCTCG
ATCGACCAGG ACGGCTTCGT TCGGGTATTC GACCGCAAGA AGGACATGAT CAACCGCGGC
GGCTTCAAGA TCTTCTCGGC GGAAGTCGAG AACGTGATCT GCGGCATCGA CGGCGTGCTG
GAAACCGCGA TCATCGGCAC GCCCGACCCA GTGCTCGGCG AGCGCGTCAA CGCCATCGTG
GTGACAAGCG AAGGCGCCAG CCTCAACGAG CGCGACGTCG CCGCCTACTG CGCGGCACGG
ATGTCGGACT ACAAAGTGCC GGAGAGCATC ATCATCCGCT CCGAGCCCCT GCCCCGCAAT
GCCAACGGCA AGATTCAGAA AACGGTGCTG CGCGAGACAA TCGCTGACCG GGCGGCGAGT
TACGCTCGGT CCTAG
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| Protein sequence | MTFWPEAGIG GALRRETHYD GRSMLCFSER PAHLAAMFDD LVARFGDRPA IVDDRALSYR
ELDLLVRKIA VSLAALGISK GDRVALFLGN CWEFLAVTLA CNRLGVLVVP IGIRQRRAEL
EFLLNNSGAK VVVFEAELTD EIPAAAEVPQ LAHRFVAHGT AEGARPFEDL LAAEPANAPL
AEMHEDDTAV ILYTSGTTGK PKGAELTHLS ILHSSYAFAR AHELTERDRG LVAVPLSHVT
GLVGVSYATI AAGGCVVLMR QAFKTADFLA LAARERITYS ILVPAIYTLA VMHPEFDKHD
LSAWRIGCFG GAPMPVPTIE MLSKRLPNLQ LRNAYGATET TSPTTIMPQA YWRDHMDSVG
QAIPYAHVRV LDADDNEVAP GEPGELLIAG PMVVPRYWQR PDANAKEFVN GYWRSGDIGS
IDQDGFVRVF DRKKDMINRG GFKIFSAEVE NVICGIDGVL ETAIIGTPDP VLGERVNAIV
VTSEGASLNE RDVAAYCAAR MSDYKVPESI IIRSEPLPRN ANGKIQKTVL RETIADRAAS
YARS
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