| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1183 |
|---|
| Symbol | |
|---|
| ID | 6408839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 1256130 |
|---|
| End bp | 1256873 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642711081 |
|---|
| Product | putative transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | YP_001990198 |
|---|
| Protein GI | 192289593 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.728081 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACA CTTCCCACCG GCCCAACAAC AATTTGTTGC GAGCGCTGAG CGCGACCGAC
TTCGAGCTGG TTCGTCCCCA TCTCAGGTGC GAGAGCCGGG CCGCCGGCGA TCTGCTGTAT
CGCCCGGGCG ATCACGTCGG CAGCGCGTAC TTTCCGTGCG GGCCGAGCCT TGTCTCCTAC
GAGGTGACCG ACGGCGACGG CCGCGGCGTC GAGACGGTGC TGGTGGGACG CGAGGGCGCG
GTTGGCGGGA TCGTCAGCTC AGGTTTCCTG CCGGCGTATT GCCTGATCAA CGTCAAGTTC
GAAGGGCCGT TCGTCCGCGT GCCGATCCTC AACATCCAGG CTGCCAAGGA TCGCTCGCCG
AGCTTCAAGA ACCTGTTTGC GCGCTATGCC GATTGCCTGA TGGCGCAGAT GTTTCAGGCG
ACCGCGTGCA ACGCGATTCA CTCGATCGAG CAGCGCACCG CGAAGTGGAT CGCCGCGGCG
ATGGACCGGA CCGGCGACAC GATGGTCCCG CTCACCCACG AGCAGCTCGC GGCGATGATG
GGCGTCGGCC GCAGCTACAC CAGTCGCGTG CTGCAGGCCT TCCGCCACGA GGGCATCCTG
ACCACGCGGC GCGGCGCGCT GATCGTCGAT GATGCCGACA AGCTGCGGCA GCGGGCCTGC
CGCTGCAACG AGGCGATCAA GGACCATTTC GACATCGTCT TGCGTGGAGT CTATCCTGAA
CCGGACGACG CGGCGGTGGC GTAG
|
|---|
| Protein sequence | MTDTSHRPNN NLLRALSATD FELVRPHLRC ESRAAGDLLY RPGDHVGSAY FPCGPSLVSY
EVTDGDGRGV ETVLVGREGA VGGIVSSGFL PAYCLINVKF EGPFVRVPIL NIQAAKDRSP
SFKNLFARYA DCLMAQMFQA TACNAIHSIE QRTAKWIAAA MDRTGDTMVP LTHEQLAAMM
GVGRSYTSRV LQAFRHEGIL TTRRGALIVD DADKLRQRAC RCNEAIKDHF DIVLRGVYPE
PDDAAVA
|
|---|
| |