| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1177 |
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| Symbol | |
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| ID | 6408833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1248612 |
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| End bp | 1249784 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642711075 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_001990192 |
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| Protein GI | 192289587 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGGAC TTCGATCGGT CTGCGCGGCC GCGGCCTTGT CGTTCGTCGC GGCAGGCGCC
CACGCCGATA CCATCAAGGT CGGCGTGATC GGCACCATGT CGGGGCCGTA CGCGCTGTTC
GGCCAGAACT TCAAGATGGG CATCGACGCT TGGGTCGCCG AGCACGGCAA CAAGGTCGGC
GGCCACACCG TCGAGTTCGT CTATCGTGAT GAGGTCTCGC CCAATCCGGC GCAGTCCAAG
GCGCTGGCGC AGGAGCTGAT CGTCAAGGAG AAGGTTCAGT ACATCGCCGG CCTGTACTTC
ACGCCGAACG CGATGGCGGT GGCGCCGCTG CTTCAGGAAG CCAAGGTGCC GATGGTGGTG
CTGAACGCGG CGACCTCCTC GATCACCGAG AAGAGCCCCT ACATCGTCCG CACCTCGTTC
ACGATGTTCC AGAACACCGT GCCGGCCGCG AAGGTCGCCA AGCAGAAGGG CGCCAAGAAG
GTTGCGATCG CTGTCAGCGA TTACGGTCCG GGTATCGACG CCGAAACCGC GTTCAAGAAG
ACCTTCGAGG CCGAAGGCGG CAGCGTCGTC GAGGCGGTCC GGATGCCGCT GGCCACCACC
GACTTCGGTC CGATCATGCA GCGGATCAAG GATTCGGGCG CCGACATGAT CTTCACCTTC
CTGCCGGCCG GTCCGCCGAC GCTCGGCTTC GTCAAAGCCT ATATCGATAA CGGCCTGAAG
GCGGCCGGCG TCAAGCTGAT GTCGACCGGC GACGTGGTCA CCGAGCCCGA TCTGCCGAAC
ATCGGCGATT CCGGCATCGG CATTCTGTCG ACCTACCACT ATGCGGTGTC GCACGACTCG
CCCGAGAACA AGGCGTTCCT CGCTCTGCTG CAGAAGGGCG GCGCCAAGCT GGGCGATGTC
ACCATGACTT CGGTCGCGGC TTACGACGGT GCCCGCCTGA TCTACAAGAT GATCGAGGCG
ACCGGCGGCA AGCAGGATCC CGAGAAGGCG ATTGCCGCCG TCAAGGACAT GAAGTGGACC
AGTCCGCGCG GACCGGTGTC GATCGATCCG ACCACCCGCC ACATCACCCA GAGCGTGTAT
CTGCGCGAGG TGGAGAAACA GGACGGTAAG CTGATCAACA AGGAGATCGA GACCTTCAAG
GATCAGCCGG ACTGGGGACT GGTTAAGCAG TAA
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| Protein sequence | MKGLRSVCAA AALSFVAAGA HADTIKVGVI GTMSGPYALF GQNFKMGIDA WVAEHGNKVG
GHTVEFVYRD EVSPNPAQSK ALAQELIVKE KVQYIAGLYF TPNAMAVAPL LQEAKVPMVV
LNAATSSITE KSPYIVRTSF TMFQNTVPAA KVAKQKGAKK VAIAVSDYGP GIDAETAFKK
TFEAEGGSVV EAVRMPLATT DFGPIMQRIK DSGADMIFTF LPAGPPTLGF VKAYIDNGLK
AAGVKLMSTG DVVTEPDLPN IGDSGIGILS TYHYAVSHDS PENKAFLALL QKGGAKLGDV
TMTSVAAYDG ARLIYKMIEA TGGKQDPEKA IAAVKDMKWT SPRGPVSIDP TTRHITQSVY
LREVEKQDGK LINKEIETFK DQPDWGLVKQ
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