| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1174 |
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| Symbol | |
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| ID | 6408830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1244598 |
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| End bp | 1245389 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711072 |
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| Product | transcriptional regulator, IclR family |
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| Protein accession | YP_001990189 |
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| Protein GI | 192289584 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCAAAC TGAAACGAAC CGCCGACGAC GGCCCGAGCG AGAGCGCCGA GTTCATCGAA
AGCCTGTCGC GCGGCTTACG GGTGATTGAA GCCTTCGGCG CCGAGAAGCG GCCGATGACG
CTGAGCGATG TCGCCAAGGC GTGCGGCCTG CCTCGCGCGA CGGCGCGACG CATCCTGCTG
ACGCTGCAAA GCGCCGGCTA TGTCAGCAGC GACGACCGGC TGTTCGCGCT GACGCCGCGC
GTCCTGGGTC TCGCATCGGC GTATCTGGCG TCCAACCAGA TCAGCGCGGT GCTGCAACCG
CTGATGGATC GGGTGTCGGC GAGCGCCAAG GAAGTTTGCT CGCTGGCGAT CCTCGATGGC
GACGACGCCG TGTTCGTGGC GCGCGCCAGC CCGGCGCGGG TGTTCTCGGC CGGGATCGAT
CTCGGCTATC GGCTGCCGCT GTTCTGTACG TCAGTCGGCC GGGTGCTGCT CAGCCGGCTC
GACAACAACG AACTGACGGC GGCGATCAAC GCGATGACGC TGACCAAGCA GACCGAAGAC
ACCATCACCG ACAAGCAGAC GGTGATCGCC ACCATCATCG CCGATCGCAC CAAAGGCTAC
TCGCTGGTCG ATCGCGAAGC CGAGCCCGGC TTCCGTTCGG TCGCAGTGCC GATCCGGCGC
TATGACGGCA CCATTGTCGC CGCCGCCAAT ATCGGCGCTC ATGTCGACCG TATCACCACC
GGCGAGATGA TCGACCGCTT CCTGCCGCTG CTGCAGACGA TGGCTGAAGA GGCCAGGCCG
CTGATGATGT GA
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| Protein sequence | MPKLKRTADD GPSESAEFIE SLSRGLRVIE AFGAEKRPMT LSDVAKACGL PRATARRILL
TLQSAGYVSS DDRLFALTPR VLGLASAYLA SNQISAVLQP LMDRVSASAK EVCSLAILDG
DDAVFVARAS PARVFSAGID LGYRLPLFCT SVGRVLLSRL DNNELTAAIN AMTLTKQTED
TITDKQTVIA TIIADRTKGY SLVDREAEPG FRSVAVPIRR YDGTIVAAAN IGAHVDRITT
GEMIDRFLPL LQTMAEEARP LMM
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