| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1172 |
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| Symbol | |
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| ID | 6408828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1240729 |
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| End bp | 1242081 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711070 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001990187 |
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| Protein GI | 192289582 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTCTG ATCGCGGTGG TCGTGAGAGT CTGATCGACC GGGTCGGCTC GCAACTGCCG
TCGCCGTTTG CCGGCGATCA GGAAGCAGCG TGGATCGAAG TGATCCGCAA AATGGACGAG
GTTTACGCCG ACCTGCTGCG CTACGAGACC GACCTGGAAG ACAAGAACGC GGCGCTCGAG
GAAGCGCAGG CGTTCATCTC CAGCGTGATT GAGTCGGTAT CCGACATCCT GATTGTCTGC
GACCGCCACG GCAGCATTCT GCAGGTCAAT CCGGCGGCGG TACGGCTGCT CGGCGACAGC
GCCGGCACGC TGCTGCATCG GTCGCTCACC GATCTCGTCG ATCCCGCCGA TCGTGCCCGG
ATCGACGCGC TGTTGCAGGC GCAGTGTCCG AGCGAAATCA GCAATCTGGA GATCCGCTTC
ATCACCGAGC GTGGGCTGTC CGATCTCTAT GCGATCAACG GTGCGACCCG CTGCGATCCG
GCCGGCCACC GGCTCGGCGC GGTGCTCACC GGACGCCCGA TCGGCGAGCT GCGGCGCGCC
TATGAGGCGC TGCATGCCGC GCATAGCGAG CTGCAGCACG CGCAGCGCCA GCTTGTCGAG
CAGGAGAAGA TGGCGAGCCT CGGACGCTTG GTCGCGGGCG TCGCGCATGA ACTCAACAAT
CCGATCAGCT TCATCTACGG CAACATCCAT ACGCTCGATC GCTATCGCGA CCGGATGTCG
GCGTATCTCG GCGCGATCCA TCGCGGCGCC GAACCGGCCG AGATCGAACG GCTGCGCCGC
GACTTGAAGA TCGACGCGCT GCTCGCCGAT TACGGCTCAC TGATCGAAGG CACACTGGAA
GGCGCGATGC GGGTTGCCGA CGTCGTCAAG AACCTGCGGC GGCTCAGCTT CCCGAAGAGC
GGCGAGAGCC TGCGCGTCGA TGTCGATCGC GTGGTGCGCA CCGCAGTGCG CTGGGCAGCG
CGCGCCAAAC CGCATCACGT CGACTTCGCT TTCGAGATCG CGCCCGAACT GGCGATCCTC
GGCAACGAGG GCCAGTTCCA CCAGATCATC GTCAATCTGG TCGACAACGC GCTCGACGCG
GTGCGCGGCC AATCTGCGCC GCGGATCGAG ATCGCGGCAC GGCGCGGCGG CGACCAGATC
GTGATCACCG TGTCGGATAA CGGCGCCGGC CTGCCCGATG GACTGATCGA CAAGATCTTC
GAGCCGTTCT TCACCACCAA GCCGGTCGGT GAAGGTACCG GGCTCGGCTT GTGGATCAGT
TATGGCATCG CGCGCGAACA CGGCGGCACG TTGGCGGCAG CGAACCGCAA CGGCGGCGGC
GCGGTATTTA CCTTGGCGCT TCCCGCGGCC TGA
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| Protein sequence | MRSDRGGRES LIDRVGSQLP SPFAGDQEAA WIEVIRKMDE VYADLLRYET DLEDKNAALE
EAQAFISSVI ESVSDILIVC DRHGSILQVN PAAVRLLGDS AGTLLHRSLT DLVDPADRAR
IDALLQAQCP SEISNLEIRF ITERGLSDLY AINGATRCDP AGHRLGAVLT GRPIGELRRA
YEALHAAHSE LQHAQRQLVE QEKMASLGRL VAGVAHELNN PISFIYGNIH TLDRYRDRMS
AYLGAIHRGA EPAEIERLRR DLKIDALLAD YGSLIEGTLE GAMRVADVVK NLRRLSFPKS
GESLRVDVDR VVRTAVRWAA RAKPHHVDFA FEIAPELAIL GNEGQFHQII VNLVDNALDA
VRGQSAPRIE IAARRGGDQI VITVSDNGAG LPDGLIDKIF EPFFTTKPVG EGTGLGLWIS
YGIAREHGGT LAAANRNGGG AVFTLALPAA
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