| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1170 |
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| Symbol | |
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| ID | 6408826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1238204 |
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| End bp | 1239250 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642711068 |
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| Product | hydrogenase expression/formation protein HypE |
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| Protein accession | YP_001990185 |
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| Protein GI | 192289580 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0309] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACC GGATCAGGCG GCGCAAGCTC GATCTCGCGC ACGGTCGCGT CGACCTCTCG
CACGGCGCCG GTGGCCGCGC GATGGCGCAT CTGATCGGCG AGATCTTCCA CGCCGCCTTC
GACAACCCGA TGCTGCGCGC CGGCAACGAC CAGGCGGCGT TCGAAGTGGC GGCGGGTCGG
ATGGTGATGA CCACCGACGG TTACGTGGTG TCGCCGCTGT TCTTCCCCGG CGGCGATATC
GGCTCGCTCG CCGTGCACGG CACCATCAAC GACGTCGCGA TGGCTGGCGC CAGGCCGCTG
TATCTGTCGG CCGGCTTCAT CATCGAGGAG GGGTTTGCGT TCGGCGATCT CAAGCGGATC
GCCGACAGCA TGGCGGCGGC GTCGCGCGCG GCCGGCGTGC CGATCGTCAC CGGCGACACC
AAGGTGGTGG AGCGCGGCAA GGCCGATGGC GTGTTCATCA CCACGACGGG CGTCGGCATC
GCGCCGCGCG ACCTGGTGCT GTCCGCCGAG CAGGCCCGGC CCGGCGACAA GGTGCTGCTG
TCGGGCTTCA TCGGTGACCA CGGCGTTGCG GTGATGTCGC AGCGGCAGAA TCTCGCGTTC
GAAACATCGA TCCAATCGGA CAGCGCCGCG CTGCACGAGC TGGTCGCCGC CATGGTGGCG
GCTGCGCCGC AGGGCCTGCG GGTGATGCGC GATCCGACCC GCGGCGGGCT CGCCGCGACC
TTGAACGAGC TGGCGCAGCA ATCCGCGGTC GGCTTCCGGC TCGATGAGGA TGCGGTGCCG
GTGCGGCCCG AAGTGGCGGC GGCGTGTGAA CTGCTCGGGC TAGATCCACT GTATGTCGCC
AACGAGGGGA AACTGGTGGC AGTCGCGGCG CCGGAGGCAG CCGATGCGCT GCTCGCCGCG
ATGCGGGCGC ATCCGCTCGG GCGCGATGCT GCGATCATCG GCGAGGTCAT CGACGACGAT
CATCACTTTG TGCAGATGAC CACGGCGTTC GGCGGCGGCC GGATCGTCGA TTGGCTGGCC
GGCGAGCAGT TGCCGCGGAT TTGTTGA
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| Protein sequence | MSDRIRRRKL DLAHGRVDLS HGAGGRAMAH LIGEIFHAAF DNPMLRAGND QAAFEVAAGR
MVMTTDGYVV SPLFFPGGDI GSLAVHGTIN DVAMAGARPL YLSAGFIIEE GFAFGDLKRI
ADSMAAASRA AGVPIVTGDT KVVERGKADG VFITTTGVGI APRDLVLSAE QARPGDKVLL
SGFIGDHGVA VMSQRQNLAF ETSIQSDSAA LHELVAAMVA AAPQGLRVMR DPTRGGLAAT
LNELAQQSAV GFRLDEDAVP VRPEVAAACE LLGLDPLYVA NEGKLVAVAA PEAADALLAA
MRAHPLGRDA AIIGEVIDDD HHFVQMTTAF GGGRIVDWLA GEQLPRIC
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