| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1162 |
|---|
| Symbol | |
|---|
| ID | 6408818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 1231435 |
|---|
| End bp | 1231647 |
|---|
| Gene Length | 213 bp |
|---|
| Protein Length | 70 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642711060 |
|---|
| Product | Rubredoxin-type Fe(Cys)4 protein |
|---|
| Protein accession | YP_001990177 |
|---|
| Protein GI | 192289572 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1773] Rubredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0573132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGT TTGCCGCGTC TCACGACACC GAGACCGATC CACGTACCCG GATGGAATGC
GGCGTATGCT GGACCGTGTA CGACCCGGCC GAAGGCGATC CGCTCGGCCG CGCCGCGCCG
GGGACTCCGT TCGCGGCTCT GCCGGAGGAT TGGTGCTGCC CGACCTGCGA TGCTCCGCCG
GTCAAATTCC TGAGGCTGGA CGATGACCGC TGA
|
|---|
| Protein sequence | MTEFAASHDT ETDPRTRMEC GVCWTVYDPA EGDPLGRAAP GTPFAALPED WCCPTCDAPP
VKFLRLDDDR
|
|---|
| |