| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1161 |
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| Symbol | |
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| ID | 6408817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1230572 |
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| End bp | 1231438 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711059 |
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| Product | HupH hydrogenase expression protein |
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| Protein accession | YP_001990176 |
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| Protein GI | 192289571 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0867105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGTGG GCTACTGGAC CAAGCCGGAC AGTGACGACA TCGAAATGAC GCTGCTGCCG
ATCGGTGCGG GCGATGCCGG GCGCTTCGGC GTCACCGGCG CCGGCGCGAT CTCCGCATTG
GCGACCCGCG GCGGCGAGGA ATTGACGCGG CAATGCCCAT TGCTCGCCGG CACCTTGACG
CAGCTCGCCG ACGCGCTCGC CGCTCAGCGT GTCGAGGCAC CGGCCACGCT GTTGTCGATC
GATCATCTGT CGGAGACCGA GCGCAGCCTG CTCGACGACA TCCTCAGTGA AGGGGAAGTC
TCCGGCATCG TCGCGCTGCC CGATCGCCGC GTCGCTCAGG TGCAGGAATC GGTGCTCGCT
GGGCTGTGGC GGGTGCGGAT CGAGGGCGAC GCAGACGGAC CGGCGCGCGA TTACCTGGAA
ATCGGCTCGA TTCCGGCGAT CGTCAGCCGT GCCGCGCAGG ATTTTCCCGC GCCCGACATC
GAGATCACCG CGCCGCCGGC CGGCGCCATG AACGTGCAGC CGGTGCTGGC TGAAATCCGC
GAGCGGATGG CGGCACATCA GATCGGCCAG TCGTCGCACG TGATCAACTT CACGCTGCTG
CCGATGAACG AAGCCGACAT GGACCATCTC GCCGCGACGC TCGGTAATGG CGCGATCCAG
CTGTGGTCGC GCGGCTATGG AAGCTGTCGC GTGCTGGCGA CTGGCGCGCG TTCCGTCTGG
TCGGTGCAGT TCCTCAACGC GATGGATGCG CCGATCCTCG ACACCATCGA GATCGGCGAC
GTGCCGGCCG CCGTGCGTGC CGCCGATGAG GACTTTCAGG ACTCAGCCGA ACGGCTCGGC
GAAATCATCG AGGCGTACTT CCGATGA
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| Protein sequence | MRVGYWTKPD SDDIEMTLLP IGAGDAGRFG VTGAGAISAL ATRGGEELTR QCPLLAGTLT
QLADALAAQR VEAPATLLSI DHLSETERSL LDDILSEGEV SGIVALPDRR VAQVQESVLA
GLWRVRIEGD ADGPARDYLE IGSIPAIVSR AAQDFPAPDI EITAPPAGAM NVQPVLAEIR
ERMAAHQIGQ SSHVINFTLL PMNEADMDHL AATLGNGAIQ LWSRGYGSCR VLATGARSVW
SVQFLNAMDA PILDTIEIGD VPAAVRAADE DFQDSAERLG EIIEAYFR
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