| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1154 |
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| Symbol | |
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| ID | 6408810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1224638 |
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| End bp | 1225750 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642711052 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_001990169 |
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| Protein GI | 192289564 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGCAG TGACGGAAAC CTTTTACGAG GTGATCAGGC GGCAGGGGAT CACGCGGCGC
AGCTTCGTGA AATTCTGCAG TCTCACGGCC ACCAGTCTCG GCCTCGGGCC GATCGGTGCC
ACCCAGATCG CGCATGCGCT GGAGACCAAG CCGCGCGTGC CGGTGATCTG GATGCACGGG
CTGGAATGCA CCTGCTGCTC GGAAAGCTTC ATCCGCTCGG CGCATCCTCT GGTGAAGGAT
GCGGTGCTGT CGATGATCTC GCTCGATTAT GACGACACCA TCATGGCGGC GGCGGGTCAT
CAGGCCGACG CGATCCTCGA AGAGACTCGC AAGAAGTATA AAGGCCAGTA CGTGCTGGCG
GTGGAGGGCA ATCCGCCGCT GAACGAAGAC GGCATGTTCT GCATCGACGG CGGCCGCCCG
TTCGTCGAGA AACTGAAGGA AATGGCCGAA GACTCGATGG CGGTGATCGC CTGGGGGAGC
TGCGCCTCCT GGGGCTGCGT ACAGGCCGCC AAGCCCAACC CGACCAATGC CACCCCGATC
GACAAGGTGA TCCGCAACAA GCCGGTGATC AAGGTGCCGG GCTGTCCGCC GATCGCCGAA
GTCATGACCG GCGTTGTCTC CTACATCATC ACCTTTGGAC GGTTGCCCGA GCTTGACCGC
CAGGGCCGGC CGAAGATGTT CTACTCGCAG CGCATCCACG ACAAATGCTA TCGCCGGCCG
CATTTCGACG CCGGTCAGTT CGTCGAGGAA TGGGACGACG ACGGCGCGCG CAAAGGCTAC
TGCCTCTACA AGATGGGCTG CAAGGGCCCG ACTACCTACA ACGCCTGTTC GACGGTGCGC
TGGAACGGCG GCGTGTCGTT CCCGATCCAG TCCGGCCATG GTTGCATCGG CTGCTCGGAA
GACGCGTTCT GGGACAAGGG CTCGTTCTAC GACCGGCTCA CCACCATCAA TCAGTTCGGT
ATCGAGGCCA ACGCCGACAA GATCGGCGCC ACGGTCGCCG GCGTCGTCGG CACGGCGATC
GCCGCGCACG CCGCGGTGAC CACCGTGCGC AATCTGTCGC GCCGCAAGGA AGTCCCGAAC
GGCAACGGCA CCTCCAACGG CAAGTCGGCT TAA
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| Protein sequence | MGAVTETFYE VIRRQGITRR SFVKFCSLTA TSLGLGPIGA TQIAHALETK PRVPVIWMHG
LECTCCSESF IRSAHPLVKD AVLSMISLDY DDTIMAAAGH QADAILEETR KKYKGQYVLA
VEGNPPLNED GMFCIDGGRP FVEKLKEMAE DSMAVIAWGS CASWGCVQAA KPNPTNATPI
DKVIRNKPVI KVPGCPPIAE VMTGVVSYII TFGRLPELDR QGRPKMFYSQ RIHDKCYRRP
HFDAGQFVEE WDDDGARKGY CLYKMGCKGP TTYNACSTVR WNGGVSFPIQ SGHGCIGCSE
DAFWDKGSFY DRLTTINQFG IEANADKIGA TVAGVVGTAI AAHAAVTTVR NLSRRKEVPN
GNGTSNGKSA
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